Hb_000333_020

Information

Type -
Description -
Location Contig333: 17169-18635
Sequence    

Annotation

kegg
ID rcu:RCOM_0712120
description Maintenance of ploidy protein mob1, putative
nr
ID XP_012077038.1
description PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
swissprot
ID Q949G5
description MOB kinase activator-like 1A OS=Medicago sativa subsp. falcata GN=MOB1-A PE=2 SV=2
trembl
ID A0A067KQ08
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07480 PE=4 SV=1
Gene Ontology
ID GO:0005856
description mob kinase activator-like 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34918: 16140-18842
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000333_020 0.0 - - PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
2 Hb_000312_100 0.0908023246 - - PREDICTED: septum-promoting GTP-binding protein 1-like [Jatropha curcas]
3 Hb_029695_090 0.0929024756 - - PREDICTED: probable inactive patatin-like protein 9 [Jatropha curcas]
4 Hb_000881_020 0.0932519428 - - hypothetical protein MIMGU_mgv1a022110mg, partial [Erythranthe guttata]
5 Hb_004635_120 0.1029679008 - - PREDICTED: rho GTPase-activating protein 4-like [Jatropha curcas]
6 Hb_012098_100 0.1035826531 - - zinc finger protein, putative [Ricinus communis]
7 Hb_001519_090 0.1074841711 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
8 Hb_000130_460 0.111444194 - - hypothetical protein JCGZ_15296 [Jatropha curcas]
9 Hb_001817_210 0.1116227582 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001638_200 0.1119793498 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 43 [Jatropha curcas]
11 Hb_000058_180 0.1120485026 - - PREDICTED: protein ECERIFERUM 3 [Jatropha curcas]
12 Hb_017434_010 0.1142845757 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
13 Hb_005276_140 0.1149052108 - - conserved hypothetical protein [Ricinus communis]
14 Hb_031321_020 0.1177679934 - - hypothetical protein POPTR_0003s15520g [Populus trichocarpa]
15 Hb_011472_030 0.1184778846 - - PREDICTED: putative serine/threonine-protein kinase [Jatropha curcas]
16 Hb_004223_150 0.1196609064 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Jatropha curcas]
17 Hb_000413_050 0.1203544656 - - PREDICTED: transcription factor bHLH112 isoform X2 [Jatropha curcas]
18 Hb_000156_110 0.1204548012 - - Uncharacterized protein TCM_029490 [Theobroma cacao]
19 Hb_001439_080 0.1229835018 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
20 Hb_009486_050 0.123828194 - - PREDICTED: cyclin-U4-1 [Jatropha curcas]

Gene co-expression network

sample Hb_000333_020 Hb_000333_020 Hb_000312_100 Hb_000312_100 Hb_000333_020--Hb_000312_100 Hb_029695_090 Hb_029695_090 Hb_000333_020--Hb_029695_090 Hb_000881_020 Hb_000881_020 Hb_000333_020--Hb_000881_020 Hb_004635_120 Hb_004635_120 Hb_000333_020--Hb_004635_120 Hb_012098_100 Hb_012098_100 Hb_000333_020--Hb_012098_100 Hb_001519_090 Hb_001519_090 Hb_000333_020--Hb_001519_090 Hb_000312_100--Hb_001519_090 Hb_023827_030 Hb_023827_030 Hb_000312_100--Hb_023827_030 Hb_129956_010 Hb_129956_010 Hb_000312_100--Hb_129956_010 Hb_005276_140 Hb_005276_140 Hb_000312_100--Hb_005276_140 Hb_000312_100--Hb_029695_090 Hb_000413_050 Hb_000413_050 Hb_029695_090--Hb_000413_050 Hb_004223_150 Hb_004223_150 Hb_029695_090--Hb_004223_150 Hb_000007_330 Hb_000007_330 Hb_029695_090--Hb_000007_330 Hb_011472_030 Hb_011472_030 Hb_029695_090--Hb_011472_030 Hb_012395_090 Hb_012395_090 Hb_029695_090--Hb_012395_090 Hb_029695_090--Hb_000881_020 Hb_000881_020--Hb_012098_100 Hb_001158_130 Hb_001158_130 Hb_000881_020--Hb_001158_130 Hb_000042_280 Hb_000042_280 Hb_000881_020--Hb_000042_280 Hb_000881_020--Hb_004223_150 Hb_189208_070 Hb_189208_070 Hb_000881_020--Hb_189208_070 Hb_000881_020--Hb_004635_120 Hb_001638_200 Hb_001638_200 Hb_004635_120--Hb_001638_200 Hb_012395_240 Hb_012395_240 Hb_004635_120--Hb_012395_240 Hb_000156_110 Hb_000156_110 Hb_004635_120--Hb_000156_110 Hb_000538_090 Hb_000538_090 Hb_004635_120--Hb_000538_090 Hb_000000_390 Hb_000000_390 Hb_004635_120--Hb_000000_390 Hb_032920_020 Hb_032920_020 Hb_004635_120--Hb_032920_020 Hb_012098_100--Hb_000042_280 Hb_012098_100--Hb_001158_130 Hb_001488_230 Hb_001488_230 Hb_012098_100--Hb_001488_230 Hb_012098_100--Hb_189208_070 Hb_009588_010 Hb_009588_010 Hb_012098_100--Hb_009588_010 Hb_003207_120 Hb_003207_120 Hb_001519_090--Hb_003207_120 Hb_001519_090--Hb_129956_010 Hb_001519_090--Hb_005276_140 Hb_000139_040 Hb_000139_040 Hb_001519_090--Hb_000139_040 Hb_001519_090--Hb_029695_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.364171 3.39565 2.60931 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0850428 0 0 2.44975

CAGE analysis