Hb_000333_030

Information

Type -
Description -
Location Contig333: 20318-25281
Sequence    

Annotation

kegg
ID rcu:RCOM_0712110
description hypothetical protein
nr
ID XP_012077041.1
description PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID A0A067KNN9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07481 PE=4 SV=1
Gene Ontology
ID GO:0005794
description gdp-fucose o-fucosyltransferase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34919: 23751-25514
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000333_030 0.0 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
2 Hb_000574_170 0.0888548163 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump-like [Jatropha curcas]
3 Hb_010222_040 0.1045235876 - - PREDICTED: kinesin-2 [Jatropha curcas]
4 Hb_002217_360 0.107347798 - - PREDICTED: nuclear poly(A) polymerase 3 isoform X1 [Jatropha curcas]
5 Hb_001677_040 0.1116525262 - - PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Jatropha curcas]
6 Hb_000083_080 0.1304834545 - - PREDICTED: uncharacterized protein LOC105644669 [Jatropha curcas]
7 Hb_002662_110 0.1325977056 - - Kinesin heavy chain, putative [Ricinus communis]
8 Hb_000417_050 0.1383586985 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1 [Jatropha curcas]
9 Hb_002495_030 0.1388994184 - - PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Jatropha curcas]
10 Hb_189003_070 0.1393132625 - - PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Jatropha curcas]
11 Hb_028396_020 0.1408102148 - - PREDICTED: ras-related protein Rab7 [Jatropha curcas]
12 Hb_000856_200 0.1410347343 - - ATPase 4, plasma membrane-type -like protein [Gossypium arboreum]
13 Hb_001104_150 0.1414480475 - - PREDICTED: protein ROS1 [Jatropha curcas]
14 Hb_093077_010 0.1444119842 transcription factor TF Family: G2-like PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
15 Hb_144449_010 0.1445279209 - - Potassium transporter, putative [Ricinus communis]
16 Hb_000347_190 0.1451569172 - - PREDICTED: transmembrane protein 87A [Jatropha curcas]
17 Hb_001357_050 0.1454201111 - - PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Jatropha curcas]
18 Hb_001252_030 0.1459323685 - - Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
19 Hb_005276_070 0.1461921264 - - PREDICTED: RAN GTPase-activating protein 1 [Jatropha curcas]
20 Hb_003849_070 0.1469125559 - - PREDICTED: uncharacterized protein LOC105644690 [Jatropha curcas]

Gene co-expression network

sample Hb_000333_030 Hb_000333_030 Hb_000574_170 Hb_000574_170 Hb_000333_030--Hb_000574_170 Hb_010222_040 Hb_010222_040 Hb_000333_030--Hb_010222_040 Hb_002217_360 Hb_002217_360 Hb_000333_030--Hb_002217_360 Hb_001677_040 Hb_001677_040 Hb_000333_030--Hb_001677_040 Hb_000083_080 Hb_000083_080 Hb_000333_030--Hb_000083_080 Hb_002662_110 Hb_002662_110 Hb_000333_030--Hb_002662_110 Hb_000574_170--Hb_002217_360 Hb_000482_120 Hb_000482_120 Hb_000574_170--Hb_000482_120 Hb_000959_130 Hb_000959_130 Hb_000574_170--Hb_000959_130 Hb_000574_170--Hb_010222_040 Hb_010337_040 Hb_010337_040 Hb_000574_170--Hb_010337_040 Hb_000856_200 Hb_000856_200 Hb_010222_040--Hb_000856_200 Hb_010557_020 Hb_010557_020 Hb_010222_040--Hb_010557_020 Hb_000290_030 Hb_000290_030 Hb_010222_040--Hb_000290_030 Hb_144449_010 Hb_144449_010 Hb_010222_040--Hb_144449_010 Hb_001318_100 Hb_001318_100 Hb_010222_040--Hb_001318_100 Hb_002217_360--Hb_010222_040 Hb_000834_180 Hb_000834_180 Hb_002217_360--Hb_000834_180 Hb_001946_200 Hb_001946_200 Hb_002217_360--Hb_001946_200 Hb_093077_010 Hb_093077_010 Hb_002217_360--Hb_093077_010 Hb_001195_660 Hb_001195_660 Hb_001677_040--Hb_001195_660 Hb_000417_050 Hb_000417_050 Hb_001677_040--Hb_000417_050 Hb_001677_040--Hb_002662_110 Hb_002675_080 Hb_002675_080 Hb_001677_040--Hb_002675_080 Hb_001053_020 Hb_001053_020 Hb_001677_040--Hb_001053_020 Hb_000130_140 Hb_000130_140 Hb_000083_080--Hb_000130_140 Hb_003580_050 Hb_003580_050 Hb_000083_080--Hb_003580_050 Hb_000083_080--Hb_000417_050 Hb_000083_080--Hb_002662_110 Hb_001936_190 Hb_001936_190 Hb_000083_080--Hb_001936_190 Hb_004994_330 Hb_004994_330 Hb_002662_110--Hb_004994_330 Hb_005276_070 Hb_005276_070 Hb_002662_110--Hb_005276_070 Hb_000612_090 Hb_000612_090 Hb_002662_110--Hb_000612_090 Hb_003416_020 Hb_003416_020 Hb_002662_110--Hb_003416_020 Hb_000679_080 Hb_000679_080 Hb_002662_110--Hb_000679_080 Hb_032631_030 Hb_032631_030 Hb_002662_110--Hb_032631_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.299558 2.30648 6.34133 10.5078 0.707367 0.799429
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.117876 0.0927469 0.245962 3.15975 10.102

CAGE analysis