Hb_000333_150

Information

Type -
Description -
Location Contig333: 135977-138305
Sequence    

Annotation

kegg
ID rcu:RCOM_0711500
description hypothetical protein
nr
ID XP_002516265.1
description hypothetical protein RCOM_0711500 [Ricinus communis]
swissprot
ID Q6AWT8
description Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis thaliana GN=GG3 PE=2 SV=1
trembl
ID B9RR96
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0711500 PE=4 SV=1
Gene Ontology
ID GO:0005834
description guanine nucleotide-binding protein subunit gamma 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34943: 138367-138513
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000333_150 0.0 - - hypothetical protein RCOM_0711500 [Ricinus communis]
2 Hb_008978_010 0.0712931586 - - transmembrane receptor, putative [Ricinus communis]
3 Hb_004994_070 0.0733328722 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
4 Hb_000959_290 0.0849753325 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
5 Hb_044026_010 0.0869725565 - - PREDICTED: cytochrome P450 93A3-like [Jatropha curcas]
6 Hb_078477_010 0.0886438088 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
7 Hb_093204_010 0.0899365511 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000336_170 0.0931773772 - - Polcalcin Jun o, putative [Ricinus communis]
9 Hb_006519_010 0.0945686247 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]
10 Hb_011111_010 0.0973811037 - - PREDICTED: putative RING-H2 finger protein ATL21A [Jatropha curcas]
11 Hb_005648_030 0.1008488126 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH18-like [Jatropha curcas]
12 Hb_000261_540 0.1012934118 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Jatropha curcas]
13 Hb_110048_010 0.1084692571 - - PREDICTED: uncharacterized protein LOC104887199 [Beta vulgaris subsp. vulgaris]
14 Hb_022630_010 0.1084874503 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
15 Hb_001405_260 0.1113621268 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
16 Hb_163950_060 0.1134383262 - - multidrug resistance pump, putative [Ricinus communis]
17 Hb_186671_020 0.1137350773 - - ankyrin repeat-containing protein, putative [Ricinus communis]
18 Hb_120917_010 0.1138153734 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
19 Hb_001190_020 0.1202363588 - - ankyrin repeat-containing protein, putative [Ricinus communis]
20 Hb_004117_360 0.1233696029 - - hypothetical protein JCGZ_00367 [Jatropha curcas]

Gene co-expression network

sample Hb_000333_150 Hb_000333_150 Hb_008978_010 Hb_008978_010 Hb_000333_150--Hb_008978_010 Hb_004994_070 Hb_004994_070 Hb_000333_150--Hb_004994_070 Hb_000959_290 Hb_000959_290 Hb_000333_150--Hb_000959_290 Hb_044026_010 Hb_044026_010 Hb_000333_150--Hb_044026_010 Hb_078477_010 Hb_078477_010 Hb_000333_150--Hb_078477_010 Hb_093204_010 Hb_093204_010 Hb_000333_150--Hb_093204_010 Hb_163950_060 Hb_163950_060 Hb_008978_010--Hb_163950_060 Hb_000336_170 Hb_000336_170 Hb_008978_010--Hb_000336_170 Hb_186671_020 Hb_186671_020 Hb_008978_010--Hb_186671_020 Hb_011980_020 Hb_011980_020 Hb_008978_010--Hb_011980_020 Hb_000261_540 Hb_000261_540 Hb_008978_010--Hb_000261_540 Hb_006519_010 Hb_006519_010 Hb_004994_070--Hb_006519_010 Hb_004994_070--Hb_093204_010 Hb_004994_070--Hb_000959_290 Hb_011111_010 Hb_011111_010 Hb_004994_070--Hb_011111_010 Hb_002572_060 Hb_002572_060 Hb_004994_070--Hb_002572_060 Hb_000959_290--Hb_006519_010 Hb_001190_020 Hb_001190_020 Hb_000959_290--Hb_001190_020 Hb_000959_290--Hb_002572_060 Hb_000959_290--Hb_093204_010 Hb_001405_260 Hb_001405_260 Hb_044026_010--Hb_001405_260 Hb_110048_010 Hb_110048_010 Hb_044026_010--Hb_110048_010 Hb_004157_080 Hb_004157_080 Hb_044026_010--Hb_004157_080 Hb_005648_030 Hb_005648_030 Hb_044026_010--Hb_005648_030 Hb_111908_010 Hb_111908_010 Hb_044026_010--Hb_111908_010 Hb_022630_010 Hb_022630_010 Hb_078477_010--Hb_022630_010 Hb_078477_010--Hb_005648_030 Hb_004656_030 Hb_004656_030 Hb_078477_010--Hb_004656_030 Hb_078477_010--Hb_001405_260 Hb_078477_010--Hb_044026_010 Hb_093204_010--Hb_011111_010 Hb_093204_010--Hb_006519_010 Hb_004767_040 Hb_004767_040 Hb_093204_010--Hb_004767_040 Hb_093204_010--Hb_002572_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 84.6741 2.38047 2.59228 0.0228794 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.354773 0

CAGE analysis