Hb_000334_170

Information

Type -
Description -
Location Contig334: 142207-149237
Sequence    

Annotation

kegg
ID pmum:103330632
description peptidyl-prolyl cis-trans isomerase FKBP42
nr
ID XP_012065588.1
description PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP42 isoform X1 [Jatropha curcas]
swissprot
ID Q9LDC0
description Peptidyl-prolyl cis-trans isomerase FKBP42 OS=Arabidopsis thaliana GN=FKBP42 PE=1 SV=1
trembl
ID A0A067L8B2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16780 PE=4 SV=1
Gene Ontology
ID GO:0005515
description peptidyl-prolyl cis-trans isomerase fkbp42

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35035: 142254-149063
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000334_170 0.0 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP42 isoform X1 [Jatropha curcas]
2 Hb_000260_560 0.0858639088 - - PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Jatropha curcas]
3 Hb_001040_070 0.1012952958 - - PREDICTED: uncharacterized protein LOC105649523 [Jatropha curcas]
4 Hb_001232_100 0.1069347207 - - Heat shock 70 kDa protein, putative [Ricinus communis]
5 Hb_000175_630 0.1090674612 - - PREDICTED: pentatricopeptide repeat-containing protein At5g11310, mitochondrial [Jatropha curcas]
6 Hb_000264_230 0.1105503577 - - PREDICTED: uncharacterized protein LOC105649528 [Jatropha curcas]
7 Hb_000041_300 0.112774343 transcription factor TF Family: SNF2 PREDICTED: uncharacterized ATP-dependent helicase C23E6.02 isoform X2 [Jatropha curcas]
8 Hb_000958_070 0.1180310591 - - hypothetical protein PRUPE_ppa007681mg [Prunus persica]
9 Hb_005181_040 0.1206787029 - - PREDICTED: MAP kinase kinase MKK1/SSP32-like [Jatropha curcas]
10 Hb_002233_130 0.1209386628 - - transporter, putative [Ricinus communis]
11 Hb_006052_030 0.1212636774 - - PREDICTED: dnaJ protein ERDJ3A [Jatropha curcas]
12 Hb_006618_040 0.1216245134 - - PREDICTED: hsp70-Hsp90 organizing protein 3-like [Jatropha curcas]
13 Hb_000086_150 0.1217219118 transcription factor TF Family: Jumonji PREDICTED: putative lysine-specific demethylase JMJ16 isoform X1 [Jatropha curcas]
14 Hb_003900_030 0.1245485569 - - PREDICTED: pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Jatropha curcas]
15 Hb_000264_180 0.1268874113 - - PREDICTED: uncharacterized protein LOC100777318 [Glycine max]
16 Hb_022250_100 0.1302807454 - - calnexin, putative [Ricinus communis]
17 Hb_003470_070 0.1319614345 - - rubisco subunit binding-protein beta subunit, rubb, putative [Ricinus communis]
18 Hb_002400_230 0.1324273148 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Jatropha curcas]
19 Hb_009486_080 0.1326940605 - - PREDICTED: uncharacterized protein LOC105643242 [Jatropha curcas]
20 Hb_004254_100 0.1333395112 - - PREDICTED: synaptotagmin-4 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000334_170 Hb_000334_170 Hb_000260_560 Hb_000260_560 Hb_000334_170--Hb_000260_560 Hb_001040_070 Hb_001040_070 Hb_000334_170--Hb_001040_070 Hb_001232_100 Hb_001232_100 Hb_000334_170--Hb_001232_100 Hb_000175_630 Hb_000175_630 Hb_000334_170--Hb_000175_630 Hb_000264_230 Hb_000264_230 Hb_000334_170--Hb_000264_230 Hb_000041_300 Hb_000041_300 Hb_000334_170--Hb_000041_300 Hb_000958_070 Hb_000958_070 Hb_000260_560--Hb_000958_070 Hb_002233_130 Hb_002233_130 Hb_000260_560--Hb_002233_130 Hb_000573_060 Hb_000573_060 Hb_000260_560--Hb_000573_060 Hb_000086_150 Hb_000086_150 Hb_000260_560--Hb_000086_150 Hb_001244_150 Hb_001244_150 Hb_000260_560--Hb_001244_150 Hb_009486_080 Hb_009486_080 Hb_000260_560--Hb_009486_080 Hb_005181_040 Hb_005181_040 Hb_001040_070--Hb_005181_040 Hb_000264_180 Hb_000264_180 Hb_001040_070--Hb_000264_180 Hb_003470_070 Hb_003470_070 Hb_001040_070--Hb_003470_070 Hb_004254_100 Hb_004254_100 Hb_001040_070--Hb_004254_100 Hb_005701_090 Hb_005701_090 Hb_001040_070--Hb_005701_090 Hb_001232_100--Hb_000260_560 Hb_006618_040 Hb_006618_040 Hb_001232_100--Hb_006618_040 Hb_001232_100--Hb_000573_060 Hb_006052_030 Hb_006052_030 Hb_001232_100--Hb_006052_030 Hb_000329_100 Hb_000329_100 Hb_001232_100--Hb_000329_100 Hb_001427_210 Hb_001427_210 Hb_000175_630--Hb_001427_210 Hb_000175_630--Hb_000041_300 Hb_000175_630--Hb_000264_180 Hb_000175_630--Hb_003470_070 Hb_012262_040 Hb_012262_040 Hb_000175_630--Hb_012262_040 Hb_003900_030 Hb_003900_030 Hb_000264_230--Hb_003900_030 Hb_003734_080 Hb_003734_080 Hb_000264_230--Hb_003734_080 Hb_000264_230--Hb_000260_560 Hb_007192_090 Hb_007192_090 Hb_000264_230--Hb_007192_090 Hb_000264_230--Hb_004254_100 Hb_022250_100 Hb_022250_100 Hb_000041_300--Hb_022250_100 Hb_004225_040 Hb_004225_040 Hb_000041_300--Hb_004225_040 Hb_026053_040 Hb_026053_040 Hb_000041_300--Hb_026053_040 Hb_000261_050 Hb_000261_050 Hb_000041_300--Hb_000261_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.0591 22.6794 25.4914 14.0136 40.839 14.1008
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.26471 4.17032 6.5551 12.6539 37.4336

CAGE analysis