Hb_000334_180

Information

Type -
Description -
Location Contig334: 150137-156475
Sequence    

Annotation

kegg
ID rcu:RCOM_0967820
description hypothetical protein
nr
ID KDP43492.1
description hypothetical protein JCGZ_16779 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L4Y9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16779 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35037: 152049-152444 , PASA_asmbl_35038: 152802-155748
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000334_180 0.0 - - hypothetical protein JCGZ_16779 [Jatropha curcas]
2 Hb_008778_010 0.1763140852 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_000566_030 0.1794173371 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
4 Hb_007380_040 0.1814882308 - - receptor-kinase, putative [Ricinus communis]
5 Hb_183443_010 0.1886192007 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
6 Hb_002035_080 0.1922444762 - - unnamed protein product [Vitis vinifera]
7 Hb_001636_020 0.1991166993 - - Serine/threonine-protein kinase PBS1 [Theobroma cacao]
8 Hb_001221_140 0.2039923292 - - DNA binding protein, putative [Ricinus communis]
9 Hb_003939_040 0.2077172995 - - hypothetical protein CICLE_v10014350mg [Citrus clementina]
10 Hb_000406_060 0.2082255418 - - hypothetical protein CICLE_v10000115mg [Citrus clementina]
11 Hb_003471_020 0.2088739276 - - PREDICTED: ADP-ribosylation factor-like protein 8A [Jatropha curcas]
12 Hb_000512_030 0.209566484 - - wall-associated kinase, putative [Ricinus communis]
13 Hb_011716_110 0.2098415693 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
14 Hb_001781_020 0.2126044342 - - PREDICTED: pyruvate kinase, cytosolic isozyme-like [Jatropha curcas]
15 Hb_000739_080 0.2153026214 - - PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Jatropha curcas]
16 Hb_008221_170 0.2154073295 transcription factor TF Family: BES1 PREDICTED: BES1/BZR1 homolog protein 4 isoform X1 [Populus euphratica]
17 Hb_008494_050 0.2174657918 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
18 Hb_007885_090 0.2187605989 - - hypothetical protein POPTR_0001s08950g [Populus trichocarpa]
19 Hb_009367_080 0.2236050401 transcription factor TF Family: WRKY WRKY transcription factor 42 [Jatropha curcas]
20 Hb_027136_010 0.2239805307 - - hypothetical protein L484_010426 [Morus notabilis]

Gene co-expression network

sample Hb_000334_180 Hb_000334_180 Hb_008778_010 Hb_008778_010 Hb_000334_180--Hb_008778_010 Hb_000566_030 Hb_000566_030 Hb_000334_180--Hb_000566_030 Hb_007380_040 Hb_007380_040 Hb_000334_180--Hb_007380_040 Hb_183443_010 Hb_183443_010 Hb_000334_180--Hb_183443_010 Hb_002035_080 Hb_002035_080 Hb_000334_180--Hb_002035_080 Hb_001636_020 Hb_001636_020 Hb_000334_180--Hb_001636_020 Hb_004899_060 Hb_004899_060 Hb_008778_010--Hb_004899_060 Hb_008778_010--Hb_002035_080 Hb_005976_050 Hb_005976_050 Hb_008778_010--Hb_005976_050 Hb_089206_010 Hb_089206_010 Hb_008778_010--Hb_089206_010 Hb_008778_010--Hb_000566_030 Hb_001781_020 Hb_001781_020 Hb_000566_030--Hb_001781_020 Hb_001021_070 Hb_001021_070 Hb_000566_030--Hb_001021_070 Hb_001221_140 Hb_001221_140 Hb_000566_030--Hb_001221_140 Hb_000366_200 Hb_000366_200 Hb_000566_030--Hb_000366_200 Hb_004411_030 Hb_004411_030 Hb_000566_030--Hb_004411_030 Hb_004657_030 Hb_004657_030 Hb_007380_040--Hb_004657_030 Hb_000406_060 Hb_000406_060 Hb_007380_040--Hb_000406_060 Hb_000106_020 Hb_000106_020 Hb_007380_040--Hb_000106_020 Hb_003471_020 Hb_003471_020 Hb_007380_040--Hb_003471_020 Hb_004040_040 Hb_004040_040 Hb_007380_040--Hb_004040_040 Hb_183443_010--Hb_089206_010 Hb_146339_010 Hb_146339_010 Hb_183443_010--Hb_146339_010 Hb_063943_010 Hb_063943_010 Hb_183443_010--Hb_063943_010 Hb_183443_010--Hb_000566_030 Hb_174473_010 Hb_174473_010 Hb_183443_010--Hb_174473_010 Hb_000193_140 Hb_000193_140 Hb_002035_080--Hb_000193_140 Hb_135442_010 Hb_135442_010 Hb_002035_080--Hb_135442_010 Hb_002035_090 Hb_002035_090 Hb_002035_080--Hb_002035_090 Hb_133748_010 Hb_133748_010 Hb_002035_080--Hb_133748_010 Hb_002972_020 Hb_002972_020 Hb_001636_020--Hb_002972_020 Hb_001636_020--Hb_000406_060 Hb_000021_030 Hb_000021_030 Hb_001636_020--Hb_000021_030 Hb_001009_080 Hb_001009_080 Hb_001636_020--Hb_001009_080 Hb_001427_070 Hb_001427_070 Hb_001636_020--Hb_001427_070 Hb_002836_100 Hb_002836_100 Hb_001636_020--Hb_002836_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.72313 2.75423 0.654781 2.72009 1.73543 2.00354
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0170252 0 2.14684 4.13264 0.940457

CAGE analysis