Hb_000336_130

Information

Type -
Description -
Location Contig336: 203340-206380
Sequence    

Annotation

kegg
ID rcu:RCOM_1677770
description Triacylglycerol lipase 2 precursor, putative (EC:3.1.1.3)
nr
ID XP_002509537.1
description Triacylglycerol lipase 2 precursor, putative [Ricinus communis]
swissprot
ID Q67ZU1
description Triacylglycerol lipase 2 OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1
trembl
ID Q1XBG1
description Lipase OS=Ricinus communis GN=RCOM_1677770 PE=2 SV=1
Gene Ontology
ID GO:0016298
description triacylglycerol lipase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35158: 203167-206386
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000336_130 0.0 - - Triacylglycerol lipase 2 precursor, putative [Ricinus communis]
2 Hb_001999_330 0.0779277257 - - hypothetical protein PRUPE_ppa022262mg, partial [Prunus persica]
3 Hb_002010_010 0.0811731573 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
4 Hb_026188_010 0.090454741 - - PREDICTED: tropinone reductase homolog [Jatropha curcas]
5 Hb_171685_070 0.0930951066 - - -
6 Hb_063885_010 0.0965600699 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
7 Hb_007101_090 0.0972144433 - - PREDICTED: protein ALTERED XYLOGLUCAN 4 [Jatropha curcas]
8 Hb_001610_100 0.1043793079 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
9 Hb_009095_020 0.1125330373 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
10 Hb_001146_030 0.1142926562 - - cytochrome P450, putative [Ricinus communis]
11 Hb_003947_020 0.11537916 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
12 Hb_000645_270 0.1161036584 - - PREDICTED: uncharacterized protein LOC105122837 isoform X2 [Populus euphratica]
13 Hb_003732_030 0.1180987331 - - gibberellin 20-oxidase, putative [Ricinus communis]
14 Hb_001001_130 0.1188344377 - - hypothetical protein POPTR_0002s12860g [Populus trichocarpa]
15 Hb_000844_060 0.1209981555 - - PREDICTED: uncharacterized protein LOC105633706 [Jatropha curcas]
16 Hb_077242_020 0.1222085853 - - ribosomal protein S4 (mitochondrion) [Ricinus communis]
17 Hb_001490_020 0.1226120139 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
18 Hb_161881_010 0.1233916799 - - laccase, putative [Ricinus communis]
19 Hb_101462_010 0.1237947599 - - PREDICTED: probable receptor-like protein kinase At5g39030 isoform X2 [Jatropha curcas]
20 Hb_159308_010 0.1254698861 - - ribosomal protein S4 [Cercidiphyllum japonicum]

Gene co-expression network

sample Hb_000336_130 Hb_000336_130 Hb_001999_330 Hb_001999_330 Hb_000336_130--Hb_001999_330 Hb_002010_010 Hb_002010_010 Hb_000336_130--Hb_002010_010 Hb_026188_010 Hb_026188_010 Hb_000336_130--Hb_026188_010 Hb_171685_070 Hb_171685_070 Hb_000336_130--Hb_171685_070 Hb_063885_010 Hb_063885_010 Hb_000336_130--Hb_063885_010 Hb_007101_090 Hb_007101_090 Hb_000336_130--Hb_007101_090 Hb_001999_330--Hb_007101_090 Hb_001999_330--Hb_002010_010 Hb_000645_270 Hb_000645_270 Hb_001999_330--Hb_000645_270 Hb_000844_060 Hb_000844_060 Hb_001999_330--Hb_000844_060 Hb_009095_020 Hb_009095_020 Hb_001999_330--Hb_009095_020 Hb_161881_010 Hb_161881_010 Hb_002010_010--Hb_161881_010 Hb_003732_030 Hb_003732_030 Hb_002010_010--Hb_003732_030 Hb_002010_010--Hb_007101_090 Hb_004030_010 Hb_004030_010 Hb_002010_010--Hb_004030_010 Hb_026188_010--Hb_009095_020 Hb_026188_010--Hb_000645_270 Hb_026188_010--Hb_063885_010 Hb_034168_060 Hb_034168_060 Hb_026188_010--Hb_034168_060 Hb_026188_010--Hb_001999_330 Hb_171685_070--Hb_161881_010 Hb_171685_070--Hb_002010_010 Hb_002551_030 Hb_002551_030 Hb_171685_070--Hb_002551_030 Hb_027638_010 Hb_027638_010 Hb_171685_070--Hb_027638_010 Hb_171685_070--Hb_003732_030 Hb_003947_020 Hb_003947_020 Hb_063885_010--Hb_003947_020 Hb_063885_010--Hb_034168_060 Hb_063885_010--Hb_009095_020 Hb_000696_200 Hb_000696_200 Hb_063885_010--Hb_000696_200 Hb_001001_130 Hb_001001_130 Hb_007101_090--Hb_001001_130 Hb_052139_010 Hb_052139_010 Hb_007101_090--Hb_052139_010 Hb_007101_090--Hb_000645_270 Hb_001856_290 Hb_001856_290 Hb_007101_090--Hb_001856_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0634749 0.132391 0.217087 0 0.030492
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0624051 3.29329

CAGE analysis