Hb_000336_210

Information

Type -
Description -
Location Contig336: 266137-268221
Sequence    

Annotation

kegg
ID rcu:RCOM_1678250
description adenylate kinase 1 chloroplast, putative (EC:2.7.4.3)
nr
ID XP_012070663.1
description PREDICTED: probable adenylate kinase 7, mitochondrial [Jatropha curcas]
swissprot
ID Q8L7W7
description Probable adenylate kinase 7, mitochondrial OS=Arabidopsis thaliana GN=At3g01820 PE=2 SV=1
trembl
ID A0A067LD50
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10147 PE=3 SV=1
Gene Ontology
ID GO:0004017
description probable adenylate kinase mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35178: 266140-268170
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000336_210 0.0 - - PREDICTED: probable adenylate kinase 7, mitochondrial [Jatropha curcas]
2 Hb_000905_110 0.0463397049 - - arginine/serine rich splicing factor sf4/14, putative [Ricinus communis]
3 Hb_000875_080 0.0515213039 - - PREDICTED: (+)-delta-cadinene synthase isozyme XC14-like isoform X2 [Gossypium raimondii]
4 Hb_014834_150 0.0591917033 - - PREDICTED: phosphatidylserine decarboxylase proenzyme 1, mitochondrial isoform X1 [Jatropha curcas]
5 Hb_002272_050 0.0594297986 - - microsomal signal peptidase 23 kD subunit, putative [Ricinus communis]
6 Hb_171900_090 0.0662921807 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000297_160 0.067808483 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
8 Hb_000006_010 0.0680301041 - - conserved hypothetical protein [Ricinus communis]
9 Hb_021419_030 0.0687945675 - - hypothetical protein glysoja_023295 [Glycine soja]
10 Hb_000803_270 0.0690598772 - - PREDICTED: nuclear cap-binding protein subunit 1 [Jatropha curcas]
11 Hb_000816_250 0.0700983043 - - PREDICTED: uncharacterized protein LOC105649197 isoform X1 [Jatropha curcas]
12 Hb_163175_010 0.0711063023 - - hypothetical protein CISIN_1g036035mg, partial [Citrus sinensis]
13 Hb_005271_040 0.0719636042 - - PREDICTED: serine racemase [Jatropha curcas]
14 Hb_002986_100 0.0723579956 - - PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
15 Hb_000049_140 0.0727855848 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial [Jatropha curcas]
16 Hb_003861_060 0.0731346171 - - PREDICTED: treacle protein [Jatropha curcas]
17 Hb_001959_110 0.0735356137 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X2 [Jatropha curcas]
18 Hb_000086_170 0.0739637874 - - PREDICTED: serine/threonine-protein kinase 19 [Jatropha curcas]
19 Hb_008616_050 0.0746389034 - - PREDICTED: putative deoxyribonuclease TATDN1 [Jatropha curcas]
20 Hb_164390_010 0.074816474 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1a [Jatropha curcas]

Gene co-expression network

sample Hb_000336_210 Hb_000336_210 Hb_000905_110 Hb_000905_110 Hb_000336_210--Hb_000905_110 Hb_000875_080 Hb_000875_080 Hb_000336_210--Hb_000875_080 Hb_014834_150 Hb_014834_150 Hb_000336_210--Hb_014834_150 Hb_002272_050 Hb_002272_050 Hb_000336_210--Hb_002272_050 Hb_171900_090 Hb_171900_090 Hb_000336_210--Hb_171900_090 Hb_000297_160 Hb_000297_160 Hb_000336_210--Hb_000297_160 Hb_008847_030 Hb_008847_030 Hb_000905_110--Hb_008847_030 Hb_001021_150 Hb_001021_150 Hb_000905_110--Hb_001021_150 Hb_000905_110--Hb_014834_150 Hb_123915_040 Hb_123915_040 Hb_000905_110--Hb_123915_040 Hb_021419_030 Hb_021419_030 Hb_000905_110--Hb_021419_030 Hb_000875_080--Hb_002272_050 Hb_000049_140 Hb_000049_140 Hb_000875_080--Hb_000049_140 Hb_000875_080--Hb_000297_160 Hb_005271_040 Hb_005271_040 Hb_000875_080--Hb_005271_040 Hb_000875_080--Hb_171900_090 Hb_003861_060 Hb_003861_060 Hb_014834_150--Hb_003861_060 Hb_003513_010 Hb_003513_010 Hb_014834_150--Hb_003513_010 Hb_000816_250 Hb_000816_250 Hb_014834_150--Hb_000816_250 Hb_003647_140 Hb_003647_140 Hb_014834_150--Hb_003647_140 Hb_003428_010 Hb_003428_010 Hb_014834_150--Hb_003428_010 Hb_004052_080 Hb_004052_080 Hb_014834_150--Hb_004052_080 Hb_002272_050--Hb_171900_090 Hb_000359_040 Hb_000359_040 Hb_002272_050--Hb_000359_040 Hb_002272_050--Hb_005271_040 Hb_002272_050--Hb_000297_160 Hb_000789_320 Hb_000789_320 Hb_171900_090--Hb_000789_320 Hb_164390_010 Hb_164390_010 Hb_171900_090--Hb_164390_010 Hb_183433_010 Hb_183433_010 Hb_171900_090--Hb_183433_010 Hb_000176_020 Hb_000176_020 Hb_171900_090--Hb_000176_020 Hb_001025_090 Hb_001025_090 Hb_171900_090--Hb_001025_090 Hb_000270_680 Hb_000270_680 Hb_000297_160--Hb_000270_680 Hb_001959_110 Hb_001959_110 Hb_000297_160--Hb_001959_110 Hb_005144_090 Hb_005144_090 Hb_000297_160--Hb_005144_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.0706 18.7235 32.3738 28.3948 26.8176 17.0912
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.5389 30.2178 15.7357 23.7347 21.8134

CAGE analysis