Hb_000340_510

Information

Type -
Description -
Location Contig340: 417299-432447
Sequence    

Annotation

kegg
ID rcu:RCOM_0557160
description bsu-protein phosphatase, putative (EC:3.1.3.16)
nr
ID XP_012092339.1
description PREDICTED: serine/threonine-protein phosphatase BSL1 [Jatropha curcas]
swissprot
ID Q8L7U5
description Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana GN=BSL1 PE=1 SV=2
trembl
ID A0A067JCK6
description Serine/threonine-protein phosphatase OS=Jatropha curcas GN=JCGZ_22008 PE=3 SV=1
Gene Ontology
ID GO:0004721
description serine threonine-protein phosphatase bsl1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35591: 417210-432396
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000340_510 0.0 - - PREDICTED: serine/threonine-protein phosphatase BSL1 [Jatropha curcas]
2 Hb_002818_040 0.0523371671 - - tRNA synthetase-related family protein [Populus trichocarpa]
3 Hb_000481_010 0.0647885302 - - PREDICTED: F-box/kelch-repeat protein SKIP6 [Jatropha curcas]
4 Hb_000001_180 0.0702293434 - - PREDICTED: uncharacterized protein LOC105648978 [Jatropha curcas]
5 Hb_000107_100 0.0708092586 - - hypothetical protein JCGZ_16208 [Jatropha curcas]
6 Hb_002026_110 0.0708660174 - - protein binding protein, putative [Ricinus communis]
7 Hb_017168_010 0.0715614889 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003384_030 0.0724564536 - - PREDICTED: eukaryotic translation initiation factor 2 subunit beta-like [Jatropha curcas]
9 Hb_004324_280 0.0755108689 - - PREDICTED: plastid division protein PDV1 [Jatropha curcas]
10 Hb_000462_150 0.0756134152 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Jatropha curcas]
11 Hb_001057_010 0.0756376554 - - cation-transporting atpase plant, putative [Ricinus communis]
12 Hb_000490_030 0.0758653035 - - DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
13 Hb_012654_010 0.0762316782 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105629849 [Jatropha curcas]
14 Hb_002631_050 0.0762979204 - - membrane associated ring finger 1,8, putative [Ricinus communis]
15 Hb_001936_050 0.0795996549 - - PREDICTED: pentatricopeptide repeat-containing protein At4g08210-like [Prunus mume]
16 Hb_006400_040 0.0824313563 - - PREDICTED: uncharacterized protein LOC105642527 [Jatropha curcas]
17 Hb_002249_140 0.0836443262 - - PREDICTED: uncharacterized protein LOC105648715 [Jatropha curcas]
18 Hb_000733_060 0.0837565605 - - PREDICTED: protein GUCD1 isoform X1 [Jatropha curcas]
19 Hb_182026_010 0.0838408964 - - hypothetical protein CICLE_v10003487mg, partial [Citrus clementina]
20 Hb_001504_160 0.0840222678 - - PREDICTED: nuclear pore complex protein NUP96 [Jatropha curcas]

Gene co-expression network

sample Hb_000340_510 Hb_000340_510 Hb_002818_040 Hb_002818_040 Hb_000340_510--Hb_002818_040 Hb_000481_010 Hb_000481_010 Hb_000340_510--Hb_000481_010 Hb_000001_180 Hb_000001_180 Hb_000340_510--Hb_000001_180 Hb_000107_100 Hb_000107_100 Hb_000340_510--Hb_000107_100 Hb_002026_110 Hb_002026_110 Hb_000340_510--Hb_002026_110 Hb_017168_010 Hb_017168_010 Hb_000340_510--Hb_017168_010 Hb_000462_150 Hb_000462_150 Hb_002818_040--Hb_000462_150 Hb_003384_030 Hb_003384_030 Hb_002818_040--Hb_003384_030 Hb_002818_040--Hb_000001_180 Hb_005314_010 Hb_005314_010 Hb_002818_040--Hb_005314_010 Hb_005914_230 Hb_005914_230 Hb_002818_040--Hb_005914_230 Hb_000784_090 Hb_000784_090 Hb_000481_010--Hb_000784_090 Hb_002249_140 Hb_002249_140 Hb_000481_010--Hb_002249_140 Hb_000481_010--Hb_002026_110 Hb_000481_010--Hb_002818_040 Hb_002631_050 Hb_002631_050 Hb_000481_010--Hb_002631_050 Hb_000001_180--Hb_003384_030 Hb_004724_360 Hb_004724_360 Hb_000001_180--Hb_004724_360 Hb_000001_180--Hb_005914_230 Hb_000001_180--Hb_005314_010 Hb_004678_020 Hb_004678_020 Hb_000001_180--Hb_004678_020 Hb_001504_160 Hb_001504_160 Hb_000107_100--Hb_001504_160 Hb_012654_010 Hb_012654_010 Hb_000107_100--Hb_012654_010 Hb_000107_100--Hb_017168_010 Hb_001040_170 Hb_001040_170 Hb_000107_100--Hb_001040_170 Hb_001366_040 Hb_001366_040 Hb_000107_100--Hb_001366_040 Hb_001141_330 Hb_001141_330 Hb_002026_110--Hb_001141_330 Hb_002026_110--Hb_017168_010 Hb_002026_110--Hb_002818_040 Hb_029281_010 Hb_029281_010 Hb_002026_110--Hb_029281_010 Hb_010222_080 Hb_010222_080 Hb_017168_010--Hb_010222_080 Hb_002942_220 Hb_002942_220 Hb_017168_010--Hb_002942_220 Hb_012132_030 Hb_012132_030 Hb_017168_010--Hb_012132_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
77.6811 28.1946 12.6333 12.9963 86.4586 70.1353
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
42.2659 39.3093 52.7042 20.2536 10.6541

CAGE analysis