Hb_000343_090

Information

Type transcription factor
Description TF Family: OFP
Location Contig343: 57766-58628
Sequence    

Annotation

kegg
ID rcu:RCOM_0980900
description hypothetical protein
nr
ID XP_002528201.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9S7T5
description Transcription repressor OFP14 OS=Arabidopsis thaliana GN=OFP14 PE=1 SV=1
trembl
ID B9SQD2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0980900 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000343_090 0.0 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
2 Hb_008714_030 0.0730009144 - - Multidrug resistance protein ABC transporter family protein, putative [Theobroma cacao]
3 Hb_011501_020 0.0946043595 - - PREDICTED: uncharacterized protein LOC105648929 [Jatropha curcas]
4 Hb_010721_040 0.1073422034 transcription factor TF Family: M-type unnamed protein product [Vitis vinifera]
5 Hb_000997_370 0.1183741994 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Jatropha curcas]
6 Hb_005539_150 0.1184931888 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 33 [Jatropha curcas]
7 Hb_000654_020 0.1245000991 - - hypothetical protein CICLE_v10006262mg [Citrus clementina]
8 Hb_002245_060 0.1267072767 - - PREDICTED: kinesin-3 isoform X1 [Jatropha curcas]
9 Hb_010883_160 0.1279356637 - - PREDICTED: pathogenesis-related protein 5 isoform X1 [Jatropha curcas]
10 Hb_000563_520 0.1295030766 - - multidrug resistance pump, putative [Ricinus communis]
11 Hb_000122_230 0.1332427693 - - laccase, putative [Ricinus communis]
12 Hb_001097_030 0.1346213777 - - nuclear transport factor, putative [Ricinus communis]
13 Hb_025623_010 0.136801115 - - -
14 Hb_011519_040 0.1392385753 - - hypothetical protein POPTR_0015s04770g [Populus trichocarpa]
15 Hb_000749_280 0.1416766392 - - PREDICTED: uncharacterized protein LOC105138169 [Populus euphratica]
16 Hb_002081_140 0.1423185699 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000029_210 0.143040423 - - protein binding protein, putative [Ricinus communis]
18 Hb_000809_010 0.1434072307 - - hypothetical protein JCGZ_12342 [Jatropha curcas]
19 Hb_000538_110 0.1453013982 - - sucrose synthase 1 [Hevea brasiliensis]
20 Hb_133076_010 0.1456054016 - - PREDICTED: scopoletin glucosyltransferase-like [Populus euphratica]

Gene co-expression network

sample Hb_000343_090 Hb_000343_090 Hb_008714_030 Hb_008714_030 Hb_000343_090--Hb_008714_030 Hb_011501_020 Hb_011501_020 Hb_000343_090--Hb_011501_020 Hb_010721_040 Hb_010721_040 Hb_000343_090--Hb_010721_040 Hb_000997_370 Hb_000997_370 Hb_000343_090--Hb_000997_370 Hb_005539_150 Hb_005539_150 Hb_000343_090--Hb_005539_150 Hb_000654_020 Hb_000654_020 Hb_000343_090--Hb_000654_020 Hb_000090_010 Hb_000090_010 Hb_008714_030--Hb_000090_010 Hb_006351_090 Hb_006351_090 Hb_008714_030--Hb_006351_090 Hb_008714_030--Hb_000997_370 Hb_003906_080 Hb_003906_080 Hb_008714_030--Hb_003906_080 Hb_008714_030--Hb_010721_040 Hb_025623_010 Hb_025623_010 Hb_011501_020--Hb_025623_010 Hb_000866_400 Hb_000866_400 Hb_011501_020--Hb_000866_400 Hb_002245_060 Hb_002245_060 Hb_011501_020--Hb_002245_060 Hb_005622_040 Hb_005622_040 Hb_011501_020--Hb_005622_040 Hb_121624_010 Hb_121624_010 Hb_011501_020--Hb_121624_010 Hb_102761_010 Hb_102761_010 Hb_010721_040--Hb_102761_010 Hb_094484_010 Hb_094484_010 Hb_010721_040--Hb_094484_010 Hb_004530_010 Hb_004530_010 Hb_010721_040--Hb_004530_010 Hb_025161_030 Hb_025161_030 Hb_010721_040--Hb_025161_030 Hb_002081_140 Hb_002081_140 Hb_000997_370--Hb_002081_140 Hb_000254_080 Hb_000254_080 Hb_000997_370--Hb_000254_080 Hb_002119_150 Hb_002119_150 Hb_000997_370--Hb_002119_150 Hb_004837_080 Hb_004837_080 Hb_000997_370--Hb_004837_080 Hb_000538_110 Hb_000538_110 Hb_000997_370--Hb_000538_110 Hb_029386_010 Hb_029386_010 Hb_000997_370--Hb_029386_010 Hb_000477_090 Hb_000477_090 Hb_005539_150--Hb_000477_090 Hb_005539_150--Hb_000654_020 Hb_005539_150--Hb_029386_010 Hb_005539_150--Hb_002245_060 Hb_008253_050 Hb_008253_050 Hb_005539_150--Hb_008253_050 Hb_000670_070 Hb_000670_070 Hb_005539_150--Hb_000670_070 Hb_010883_160 Hb_010883_160 Hb_000654_020--Hb_010883_160 Hb_000809_010 Hb_000809_010 Hb_000654_020--Hb_000809_010 Hb_008441_010 Hb_008441_010 Hb_000654_020--Hb_008441_010 Hb_000654_020--Hb_002245_060 Hb_000402_060 Hb_000402_060 Hb_000654_020--Hb_000402_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0470622 0.325442 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.044469 0.549435

CAGE analysis