Hb_000343_230

Information

Type -
Description -
Location Contig343: 189808-199707
Sequence    

Annotation

kegg
ID rcu:RCOM_0980140
description fk506 binding protein, putative (EC:5.2.1.8)
nr
ID XP_012073314.1
description PREDICTED: peptidyl-prolyl cis-trans isomerase PASTICCINO1 isoform X1 [Jatropha curcas]
swissprot
ID Q7DMA9
description Peptidyl-prolyl cis-trans isomerase PASTICCINO1 OS=Arabidopsis thaliana GN=PAS1 PE=1 SV=2
trembl
ID A0A067KZD6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06250 PE=4 SV=1
Gene Ontology
ID GO:0005515
description peptidyl-prolyl cis-trans isomerase pasticcino1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000343_230 0.0 - - PREDICTED: peptidyl-prolyl cis-trans isomerase PASTICCINO1 isoform X1 [Jatropha curcas]
2 Hb_005214_060 0.0948561316 - - catalytic, putative [Ricinus communis]
3 Hb_000347_280 0.0979363012 - - PREDICTED: aldehyde dehydrogenase family 7 member B4-like [Populus euphratica]
4 Hb_000116_170 0.0995452211 - - hypothetical protein JCGZ_22392 [Jatropha curcas]
5 Hb_021409_170 0.1045087491 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
6 Hb_002675_060 0.1047739607 - - PREDICTED: uncharacterized protein LOC105634954 isoform X2 [Jatropha curcas]
7 Hb_001221_040 0.1063362346 - - PREDICTED: nucleolar protein 56-like [Jatropha curcas]
8 Hb_002942_080 0.1077000022 - - PREDICTED: signal recognition particle subunit SRP68 [Jatropha curcas]
9 Hb_026099_010 0.1107275288 - - PREDICTED: E3 ubiquitin-protein ligase RHF2A isoform X2 [Jatropha curcas]
10 Hb_009913_050 0.1148838469 - - PREDICTED: partner of Y14 and mago-like [Jatropha curcas]
11 Hb_009775_050 0.1168896937 transcription factor TF Family: Orphans hypothetical protein RCOM_0575190 [Ricinus communis]
12 Hb_000046_440 0.1191224088 transcription factor TF Family: SNF2 PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X1 [Jatropha curcas]
13 Hb_007668_040 0.1193966879 - - PREDICTED: uncharacterized protein LOC103409082 [Malus domestica]
14 Hb_000335_010 0.1207860391 - - WD-repeat protein, putative [Ricinus communis]
15 Hb_007380_080 0.1212781847 transcription factor TF Family: G2-like PREDICTED: myb family transcription factor APL-like [Jatropha curcas]
16 Hb_002044_060 0.1214434851 - - elongation factor ts, putative [Ricinus communis]
17 Hb_000789_080 0.1214958835 - - PREDICTED: arginine--tRNA ligase, cytoplasmic-like isoform X1 [Jatropha curcas]
18 Hb_025557_020 0.1219650918 - - PREDICTED: activating signal cointegrator 1 [Jatropha curcas]
19 Hb_003464_020 0.1238409816 - - srpk, putative [Ricinus communis]
20 Hb_176152_010 0.123878193 - - Myosin heavy chain, fast skeletal muscle, embryonic, putative [Ricinus communis]

Gene co-expression network

sample Hb_000343_230 Hb_000343_230 Hb_005214_060 Hb_005214_060 Hb_000343_230--Hb_005214_060 Hb_000347_280 Hb_000347_280 Hb_000343_230--Hb_000347_280 Hb_000116_170 Hb_000116_170 Hb_000343_230--Hb_000116_170 Hb_021409_170 Hb_021409_170 Hb_000343_230--Hb_021409_170 Hb_002675_060 Hb_002675_060 Hb_000343_230--Hb_002675_060 Hb_001221_040 Hb_001221_040 Hb_000343_230--Hb_001221_040 Hb_009913_050 Hb_009913_050 Hb_005214_060--Hb_009913_050 Hb_002942_080 Hb_002942_080 Hb_005214_060--Hb_002942_080 Hb_005214_060--Hb_002675_060 Hb_000213_070 Hb_000213_070 Hb_005214_060--Hb_000213_070 Hb_000331_190 Hb_000331_190 Hb_005214_060--Hb_000331_190 Hb_024990_010 Hb_024990_010 Hb_005214_060--Hb_024990_010 Hb_000789_080 Hb_000789_080 Hb_000347_280--Hb_000789_080 Hb_007632_020 Hb_007632_020 Hb_000347_280--Hb_007632_020 Hb_007590_080 Hb_007590_080 Hb_000347_280--Hb_007590_080 Hb_026099_010 Hb_026099_010 Hb_000347_280--Hb_026099_010 Hb_004586_180 Hb_004586_180 Hb_000347_280--Hb_004586_180 Hb_164010_060 Hb_164010_060 Hb_000347_280--Hb_164010_060 Hb_004608_020 Hb_004608_020 Hb_000116_170--Hb_004608_020 Hb_000631_150 Hb_000631_150 Hb_000116_170--Hb_000631_150 Hb_006922_080 Hb_006922_080 Hb_000116_170--Hb_006922_080 Hb_025557_020 Hb_025557_020 Hb_000116_170--Hb_025557_020 Hb_000849_100 Hb_000849_100 Hb_000116_170--Hb_000849_100 Hb_009118_010 Hb_009118_010 Hb_000116_170--Hb_009118_010 Hb_003464_020 Hb_003464_020 Hb_021409_170--Hb_003464_020 Hb_021409_170--Hb_001221_040 Hb_000436_040 Hb_000436_040 Hb_021409_170--Hb_000436_040 Hb_000023_190 Hb_000023_190 Hb_021409_170--Hb_000023_190 Hb_000046_440 Hb_000046_440 Hb_021409_170--Hb_000046_440 Hb_021409_170--Hb_000789_080 Hb_002675_060--Hb_001221_040 Hb_002675_060--Hb_000213_070 Hb_000035_040 Hb_000035_040 Hb_002675_060--Hb_000035_040 Hb_002652_040 Hb_002652_040 Hb_002675_060--Hb_002652_040 Hb_002675_060--Hb_002942_080 Hb_002675_060--Hb_000331_190 Hb_001221_040--Hb_026099_010 Hb_004450_010 Hb_004450_010 Hb_001221_040--Hb_004450_010 Hb_001221_040--Hb_024990_010 Hb_001221_040--Hb_000046_440
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.583 7.96175 7.7682 7.16841 26.0226 26.5428
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.5424 5.79907 3.94177 15.866 6.50409

CAGE analysis