Hb_000345_150

Information

Type -
Description -
Location Contig345: 154333-158694
Sequence    

Annotation

kegg
ID rcu:RCOM_1432830
description hypothetical protein
nr
ID XP_012089027.1
description PREDICTED: uncharacterized protein LOC105647517 isoform X1 [Jatropha curcas]
swissprot
ID Q06188
description PWWP domain-containing protein YLR455W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR455W PE=1 SV=1
trembl
ID A0A067JHZ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23325 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35991: 153926-158577
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000345_150 0.0 - - PREDICTED: uncharacterized protein LOC105647517 isoform X1 [Jatropha curcas]
2 Hb_002022_070 0.0719848633 - - PREDICTED: histidine--tRNA ligase [Jatropha curcas]
3 Hb_005104_010 0.0737663202 - - PREDICTED: uncharacterized protein LOC105140796 isoform X1 [Populus euphratica]
4 Hb_000786_040 0.0751527072 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 17 [Jatropha curcas]
5 Hb_004629_010 0.0765980802 - - PREDICTED: AP-3 complex subunit delta [Jatropha curcas]
6 Hb_005539_090 0.0770045806 transcription factor TF Family: PHD PREDICTED: methyl-CpG-binding domain-containing protein 9 isoform X1 [Jatropha curcas]
7 Hb_034243_020 0.0779667506 - - PREDICTED: elongator complex protein 1 isoform X1 [Jatropha curcas]
8 Hb_007576_120 0.078526891 - - NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
9 Hb_003994_100 0.0796289305 transcription factor TF Family: PHD PREDICTED: histone acetyltransferase HAC1 isoform X1 [Jatropha curcas]
10 Hb_000120_660 0.0803282251 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
11 Hb_001231_030 0.0803563657 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Jatropha curcas]
12 Hb_004480_040 0.0830633185 - - PREDICTED: DDB1- and CUL4-associated factor homolog 1 isoform X2 [Jatropha curcas]
13 Hb_000012_140 0.0836974561 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000418_140 0.0837442583 - - PREDICTED: DNA damage-binding protein 1a [Jatropha curcas]
15 Hb_006787_060 0.0848671519 - - PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X2 [Jatropha curcas]
16 Hb_157966_010 0.0857265154 - - hypothetical protein JCGZ_13877 [Jatropha curcas]
17 Hb_000960_100 0.0862878212 - - PREDICTED: uncharacterized protein At1g51745 [Jatropha curcas]
18 Hb_001143_250 0.0867176487 - - PREDICTED: SWI/SNF complex subunit SWI3C isoform X1 [Jatropha curcas]
19 Hb_006663_040 0.0867912198 - - PREDICTED: DDB1- and CUL4-associated factor homolog 1 isoform X2 [Jatropha curcas]
20 Hb_000359_270 0.0891263196 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000345_150 Hb_000345_150 Hb_002022_070 Hb_002022_070 Hb_000345_150--Hb_002022_070 Hb_005104_010 Hb_005104_010 Hb_000345_150--Hb_005104_010 Hb_000786_040 Hb_000786_040 Hb_000345_150--Hb_000786_040 Hb_004629_010 Hb_004629_010 Hb_000345_150--Hb_004629_010 Hb_005539_090 Hb_005539_090 Hb_000345_150--Hb_005539_090 Hb_034243_020 Hb_034243_020 Hb_000345_150--Hb_034243_020 Hb_000960_100 Hb_000960_100 Hb_002022_070--Hb_000960_100 Hb_000025_320 Hb_000025_320 Hb_002022_070--Hb_000025_320 Hb_004884_010 Hb_004884_010 Hb_002022_070--Hb_004884_010 Hb_001021_200 Hb_001021_200 Hb_002022_070--Hb_001021_200 Hb_004108_100 Hb_004108_100 Hb_002022_070--Hb_004108_100 Hb_000028_510 Hb_000028_510 Hb_002022_070--Hb_000028_510 Hb_005104_010--Hb_001021_200 Hb_005104_010--Hb_004629_010 Hb_000120_660 Hb_000120_660 Hb_005104_010--Hb_000120_660 Hb_005104_010--Hb_000786_040 Hb_003106_030 Hb_003106_030 Hb_005104_010--Hb_003106_030 Hb_002784_010 Hb_002784_010 Hb_000786_040--Hb_002784_010 Hb_000230_090 Hb_000230_090 Hb_000786_040--Hb_000230_090 Hb_008253_030 Hb_008253_030 Hb_000786_040--Hb_008253_030 Hb_001767_140 Hb_001767_140 Hb_000786_040--Hb_001767_140 Hb_009112_010 Hb_009112_010 Hb_004629_010--Hb_009112_010 Hb_006787_060 Hb_006787_060 Hb_004629_010--Hb_006787_060 Hb_004629_010--Hb_000120_660 Hb_002392_030 Hb_002392_030 Hb_004629_010--Hb_002392_030 Hb_003929_140 Hb_003929_140 Hb_004629_010--Hb_003929_140 Hb_000012_140 Hb_000012_140 Hb_005539_090--Hb_000012_140 Hb_007576_120 Hb_007576_120 Hb_005539_090--Hb_007576_120 Hb_004483_040 Hb_004483_040 Hb_005539_090--Hb_004483_040 Hb_000977_120 Hb_000977_120 Hb_005539_090--Hb_000977_120 Hb_000321_150 Hb_000321_150 Hb_005539_090--Hb_000321_150 Hb_005539_090--Hb_000960_100 Hb_004543_030 Hb_004543_030 Hb_034243_020--Hb_004543_030 Hb_034243_020--Hb_004884_010 Hb_001493_040 Hb_001493_040 Hb_034243_020--Hb_001493_040 Hb_034243_020--Hb_007576_120 Hb_010315_090 Hb_010315_090 Hb_034243_020--Hb_010315_090 Hb_133047_010 Hb_133047_010 Hb_034243_020--Hb_133047_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.713 31.327 12.0662 8.49885 17.0556 22.7131
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.75841 4.94682 11.0243 12.585 15.2272

CAGE analysis