Hb_000345_500

Information

Type -
Description -
Location Contig345: 395995-399408
Sequence    

Annotation

kegg
ID cic:CICLE_v10001869mg
description hypothetical protein
nr
ID XP_012089068.1
description PREDICTED: peroxisomal adenine nucleotide carrier 1 [Jatropha curcas]
swissprot
ID Q9MA90
description Peroxisomal adenine nucleotide carrier 1 OS=Arabidopsis thaliana GN=PNC1 PE=1 SV=1
trembl
ID A0A067JVG1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23357 PE=3 SV=1
Gene Ontology
ID GO:0005743
description peroxisomal adenine nucleotide carrier 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36039: 396074-399324
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000345_500 0.0 - - PREDICTED: peroxisomal adenine nucleotide carrier 1 [Jatropha curcas]
2 Hb_002053_030 0.108117652 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
3 Hb_000776_050 0.1085363954 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
4 Hb_006043_020 0.1319122009 - - PREDICTED: GEM-like protein 5 [Jatropha curcas]
5 Hb_006538_030 0.131948101 - - PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]
6 Hb_000069_330 0.1358935117 - - protein with unknown function [Ricinus communis]
7 Hb_001863_270 0.1374042232 - - hypothetical protein JCGZ_15813 [Jatropha curcas]
8 Hb_000038_040 0.1384249166 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
9 Hb_002876_070 0.1410940607 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
10 Hb_003077_050 0.1441298327 - - PREDICTED: probable protein phosphatase 2C 63 [Jatropha curcas]
11 Hb_000532_030 0.1497079408 - - PREDICTED: oxalate--CoA ligase-like [Jatropha curcas]
12 Hb_001511_190 0.1513847949 - - PREDICTED: probable protein phosphatase 2C 25 [Jatropha curcas]
13 Hb_000805_040 0.1540570073 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
14 Hb_006935_010 0.1615189968 - - PREDICTED: inositol transporter 1 isoform X1 [Gossypium raimondii]
15 Hb_007382_100 0.1626938073 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
16 Hb_000853_100 0.1636122934 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF073 [Jatropha curcas]
17 Hb_005976_040 0.1638052454 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Jatropha curcas]
18 Hb_002122_030 0.1653115789 - - -
19 Hb_007007_080 0.1658190798 - - conserved hypothetical protein [Ricinus communis]
20 Hb_005714_100 0.1675847382 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Vitis vinifera]

Gene co-expression network

sample Hb_000345_500 Hb_000345_500 Hb_002053_030 Hb_002053_030 Hb_000345_500--Hb_002053_030 Hb_000776_050 Hb_000776_050 Hb_000345_500--Hb_000776_050 Hb_006043_020 Hb_006043_020 Hb_000345_500--Hb_006043_020 Hb_006538_030 Hb_006538_030 Hb_000345_500--Hb_006538_030 Hb_000069_330 Hb_000069_330 Hb_000345_500--Hb_000069_330 Hb_001863_270 Hb_001863_270 Hb_000345_500--Hb_001863_270 Hb_002053_030--Hb_000776_050 Hb_002053_030--Hb_006043_020 Hb_032920_040 Hb_032920_040 Hb_002053_030--Hb_032920_040 Hb_000373_250 Hb_000373_250 Hb_002053_030--Hb_000373_250 Hb_002053_030--Hb_001863_270 Hb_009476_110 Hb_009476_110 Hb_000776_050--Hb_009476_110 Hb_017857_010 Hb_017857_010 Hb_000776_050--Hb_017857_010 Hb_031108_010 Hb_031108_010 Hb_000776_050--Hb_031108_010 Hb_000473_080 Hb_000473_080 Hb_000776_050--Hb_000473_080 Hb_005976_040 Hb_005976_040 Hb_006043_020--Hb_005976_040 Hb_000260_300 Hb_000260_300 Hb_006043_020--Hb_000260_300 Hb_018563_020 Hb_018563_020 Hb_006043_020--Hb_018563_020 Hb_006043_020--Hb_006538_030 Hb_000532_030 Hb_000532_030 Hb_006538_030--Hb_000532_030 Hb_000836_160 Hb_000836_160 Hb_006538_030--Hb_000836_160 Hb_000086_610 Hb_000086_610 Hb_006538_030--Hb_000086_610 Hb_004787_100 Hb_004787_100 Hb_006538_030--Hb_004787_100 Hb_003077_050 Hb_003077_050 Hb_000069_330--Hb_003077_050 Hb_000009_200 Hb_000009_200 Hb_000069_330--Hb_000009_200 Hb_007007_080 Hb_007007_080 Hb_000069_330--Hb_007007_080 Hb_001898_130 Hb_001898_130 Hb_000069_330--Hb_001898_130 Hb_004117_170 Hb_004117_170 Hb_000069_330--Hb_004117_170 Hb_005714_100 Hb_005714_100 Hb_000069_330--Hb_005714_100 Hb_000805_040 Hb_000805_040 Hb_001863_270--Hb_000805_040 Hb_007120_010 Hb_007120_010 Hb_001863_270--Hb_007120_010 Hb_001989_060 Hb_001989_060 Hb_001863_270--Hb_001989_060 Hb_001863_270--Hb_000373_250 Hb_011360_090 Hb_011360_090 Hb_001863_270--Hb_011360_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.72772 143.368 51.6967 57.0585 3.10407 3.3079
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.9155 19.6457 13.5577 14.3301 8.99678

CAGE analysis