Hb_000347_250

Information

Type -
Description -
Location Contig347: 265368-271656
Sequence    

Annotation

kegg
ID pop:POPTR_0003s06590g
description POPTRDRAFT_817045; lipase class 3 family protein
nr
ID XP_011036456.1
description PREDICTED: uncharacterized protein LOC105133971 [Populus euphratica]
swissprot
ID Q9Y4D2
description Sn1-specific diacylglycerol lipase alpha OS=Homo sapiens GN=DAGLA PE=1 SV=3
trembl
ID A0A067KWV0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24680 PE=4 SV=1
Gene Ontology
ID GO:0016787
description sn1-specific diacylglycerol lipase alpha

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36214: 255330-264513 , PASA_asmbl_36215: 265644-265782 , PASA_asmbl_36216: 267193-267792 , PASA_asmbl_36217: 267405-267662
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000347_250 0.0 - - PREDICTED: uncharacterized protein LOC105133971 [Populus euphratica]
2 Hb_000292_100 0.0621341384 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1a [Jatropha curcas]
3 Hb_007472_070 0.0675863103 - - cir, putative [Ricinus communis]
4 Hb_062226_130 0.0705642602 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Jatropha curcas]
5 Hb_012022_040 0.0736265882 - - Protein SIS1, putative [Ricinus communis]
6 Hb_002849_130 0.0755872871 - - PREDICTED: RAB6A-GEF complex partner protein 1-like [Jatropha curcas]
7 Hb_001259_050 0.0757449631 - - calcium lipid binding protein, putative [Ricinus communis]
8 Hb_000230_400 0.0758569394 - - PREDICTED: protein ABCI12, chloroplastic isoform X1 [Jatropha curcas]
9 Hb_008279_040 0.0769177544 - - Rer1 family protein isoform 2 [Theobroma cacao]
10 Hb_003849_110 0.0776380291 - - hypothetical protein JCGZ_17842 [Jatropha curcas]
11 Hb_005162_090 0.0782614356 - - PREDICTED: uncharacterized protein LOC105648425 [Jatropha curcas]
12 Hb_003428_010 0.0787251614 - - PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Jatropha curcas]
13 Hb_002007_150 0.07967277 - - -
14 Hb_000116_450 0.07977309 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 1 [Jatropha curcas]
15 Hb_000173_280 0.0802180669 - - Speckle-type POZ protein, putative [Ricinus communis]
16 Hb_000029_060 0.0812992556 - - PREDICTED: mRNA-decapping enzyme-like protein [Jatropha curcas]
17 Hb_000365_230 0.082269851 - - PREDICTED: uncharacterized protein LOC105649056 [Jatropha curcas]
18 Hb_000738_020 0.082446161 - - zinc finger protein, putative [Ricinus communis]
19 Hb_003878_090 0.0829366877 - - PREDICTED: polynucleotide 3'-phosphatase ZDP [Jatropha curcas]
20 Hb_000521_330 0.0833175227 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000347_250 Hb_000347_250 Hb_000292_100 Hb_000292_100 Hb_000347_250--Hb_000292_100 Hb_007472_070 Hb_007472_070 Hb_000347_250--Hb_007472_070 Hb_062226_130 Hb_062226_130 Hb_000347_250--Hb_062226_130 Hb_012022_040 Hb_012022_040 Hb_000347_250--Hb_012022_040 Hb_002849_130 Hb_002849_130 Hb_000347_250--Hb_002849_130 Hb_001259_050 Hb_001259_050 Hb_000347_250--Hb_001259_050 Hb_007254_020 Hb_007254_020 Hb_000292_100--Hb_007254_020 Hb_000230_400 Hb_000230_400 Hb_000292_100--Hb_000230_400 Hb_002435_100 Hb_002435_100 Hb_000292_100--Hb_002435_100 Hb_000029_060 Hb_000029_060 Hb_000292_100--Hb_000029_060 Hb_000086_420 Hb_000086_420 Hb_000292_100--Hb_000086_420 Hb_004705_170 Hb_004705_170 Hb_007472_070--Hb_004705_170 Hb_000778_010 Hb_000778_010 Hb_007472_070--Hb_000778_010 Hb_000699_150 Hb_000699_150 Hb_007472_070--Hb_000699_150 Hb_000215_300 Hb_000215_300 Hb_007472_070--Hb_000215_300 Hb_006059_040 Hb_006059_040 Hb_007472_070--Hb_006059_040 Hb_000738_020 Hb_000738_020 Hb_062226_130--Hb_000738_020 Hb_005162_090 Hb_005162_090 Hb_062226_130--Hb_005162_090 Hb_000365_230 Hb_000365_230 Hb_062226_130--Hb_000365_230 Hb_164010_040 Hb_164010_040 Hb_062226_130--Hb_164010_040 Hb_003849_110 Hb_003849_110 Hb_062226_130--Hb_003849_110 Hb_003428_010 Hb_003428_010 Hb_062226_130--Hb_003428_010 Hb_000856_010 Hb_000856_010 Hb_012022_040--Hb_000856_010 Hb_001278_100 Hb_001278_100 Hb_012022_040--Hb_001278_100 Hb_004109_220 Hb_004109_220 Hb_012022_040--Hb_004109_220 Hb_149985_010 Hb_149985_010 Hb_012022_040--Hb_149985_010 Hb_000221_190 Hb_000221_190 Hb_012022_040--Hb_000221_190 Hb_000928_070 Hb_000928_070 Hb_012022_040--Hb_000928_070 Hb_000313_220 Hb_000313_220 Hb_002849_130--Hb_000313_220 Hb_000976_140 Hb_000976_140 Hb_002849_130--Hb_000976_140 Hb_005730_040 Hb_005730_040 Hb_002849_130--Hb_005730_040 Hb_093458_040 Hb_093458_040 Hb_002849_130--Hb_093458_040 Hb_002849_130--Hb_003428_010 Hb_015807_050 Hb_015807_050 Hb_002849_130--Hb_015807_050 Hb_008279_040 Hb_008279_040 Hb_001259_050--Hb_008279_040 Hb_003607_130 Hb_003607_130 Hb_001259_050--Hb_003607_130 Hb_001259_050--Hb_000029_060 Hb_033006_030 Hb_033006_030 Hb_001259_050--Hb_033006_030 Hb_000567_230 Hb_000567_230 Hb_001259_050--Hb_000567_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.63257 6.99166 6.08974 7.63722 4.86402 3.18361
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.5242 7.98179 4.9001 5.42826 7.35867

CAGE analysis