Hb_000347_270

Information

Type -
Description -
Location Contig347: 288272-288766
Sequence    

Annotation

kegg
ID rcu:RCOM_0391580
description hypothetical protein
nr
ID XP_012068864.1
description PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KX03
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24681 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000347_270 0.0 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
2 Hb_018202_050 0.0971220529 - - PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A [Jatropha curcas]
3 Hb_000270_160 0.1125770838 - - PREDICTED: uncharacterized protein LOC102625351 [Citrus sinensis]
4 Hb_004701_050 0.1231344387 - - alpha1 family protein [Populus trichocarpa]
5 Hb_002092_110 0.1302785676 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
6 Hb_002681_170 0.1312057733 - - PREDICTED: probable methyltransferase PMT9 [Jatropha curcas]
7 Hb_000384_080 0.1392719315 - - PREDICTED: RING-H2 finger protein ATL7-like isoform X2 [Jatropha curcas]
8 Hb_000156_160 0.1403038824 - - PREDICTED: urease accessory protein G [Jatropha curcas]
9 Hb_000879_160 0.1406663428 - - PREDICTED: F-box protein At3g12350 isoform X1 [Jatropha curcas]
10 Hb_000376_060 0.1421709156 - - PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X2 [Jatropha curcas]
11 Hb_000031_280 0.1440089198 - - -
12 Hb_002150_110 0.1442267939 - - PREDICTED: probable beta-1,3-galactosyltransferase 11 [Jatropha curcas]
13 Hb_000025_650 0.1446189033 - - exosome complex exonuclease rrp45, putative [Ricinus communis]
14 Hb_006508_030 0.1461287366 - - PREDICTED: CDPK-related kinase 1-like [Jatropha curcas]
15 Hb_000139_230 0.1465412127 transcription factor TF Family: SNF2 PREDICTED: probable ATP-dependent DNA helicase CHR12 [Jatropha curcas]
16 Hb_000538_260 0.1475287967 - - PREDICTED: serine/threonine-protein kinase HT1-like [Citrus sinensis]
17 Hb_003104_040 0.1491187708 - - PREDICTED: insulin-degrading enzyme isoform X1 [Jatropha curcas]
18 Hb_001369_350 0.1506371096 - - Cisplatin resistance-associated overexpressed protein, putative [Ricinus communis]
19 Hb_007479_070 0.1508985088 - - peroxisomal membrane protein [Hevea brasiliensis]
20 Hb_003638_010 0.1530393529 transcription factor TF Family: ARID PREDICTED: lysine-specific demethylase 5B isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000347_270 Hb_000347_270 Hb_018202_050 Hb_018202_050 Hb_000347_270--Hb_018202_050 Hb_000270_160 Hb_000270_160 Hb_000347_270--Hb_000270_160 Hb_004701_050 Hb_004701_050 Hb_000347_270--Hb_004701_050 Hb_002092_110 Hb_002092_110 Hb_000347_270--Hb_002092_110 Hb_002681_170 Hb_002681_170 Hb_000347_270--Hb_002681_170 Hb_000384_080 Hb_000384_080 Hb_000347_270--Hb_000384_080 Hb_003894_040 Hb_003894_040 Hb_018202_050--Hb_003894_040 Hb_001369_350 Hb_001369_350 Hb_018202_050--Hb_001369_350 Hb_002092_100 Hb_002092_100 Hb_018202_050--Hb_002092_100 Hb_002902_020 Hb_002902_020 Hb_018202_050--Hb_002902_020 Hb_011918_050 Hb_011918_050 Hb_018202_050--Hb_011918_050 Hb_000031_280 Hb_000031_280 Hb_000270_160--Hb_000031_280 Hb_000935_090 Hb_000935_090 Hb_000270_160--Hb_000935_090 Hb_000270_160--Hb_002681_170 Hb_000879_160 Hb_000879_160 Hb_000270_160--Hb_000879_160 Hb_000139_230 Hb_000139_230 Hb_000270_160--Hb_000139_230 Hb_089140_050 Hb_089140_050 Hb_004701_050--Hb_089140_050 Hb_162275_040 Hb_162275_040 Hb_004701_050--Hb_162275_040 Hb_000261_100 Hb_000261_100 Hb_004701_050--Hb_000261_100 Hb_000780_190 Hb_000780_190 Hb_004701_050--Hb_000780_190 Hb_010272_010 Hb_010272_010 Hb_004701_050--Hb_010272_010 Hb_000035_410 Hb_000035_410 Hb_004701_050--Hb_000035_410 Hb_000853_260 Hb_000853_260 Hb_002092_110--Hb_000853_260 Hb_003104_040 Hb_003104_040 Hb_002092_110--Hb_003104_040 Hb_001153_050 Hb_001153_050 Hb_002092_110--Hb_001153_050 Hb_002805_060 Hb_002805_060 Hb_002092_110--Hb_002805_060 Hb_000156_160 Hb_000156_160 Hb_002092_110--Hb_000156_160 Hb_002249_120 Hb_002249_120 Hb_002681_170--Hb_002249_120 Hb_002681_170--Hb_000031_280 Hb_002681_170--Hb_002092_100 Hb_008556_030 Hb_008556_030 Hb_002681_170--Hb_008556_030 Hb_002681_170--Hb_002805_060 Hb_000809_210 Hb_000809_210 Hb_002681_170--Hb_000809_210 Hb_000384_080--Hb_004701_050 Hb_000384_080--Hb_001369_350 Hb_003388_030 Hb_003388_030 Hb_000384_080--Hb_003388_030 Hb_001369_040 Hb_001369_040 Hb_000384_080--Hb_001369_040 Hb_001504_040 Hb_001504_040 Hb_000384_080--Hb_001504_040 Hb_002631_140 Hb_002631_140 Hb_000384_080--Hb_002631_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.0545 17.8865 16.3475 18.362 25.6293 20.7159
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.05076 4.93108 0.906131 6.20025 22.1944

CAGE analysis