Hb_000347_370

Information

Type -
Description -
Location Contig347: 383273-385244
Sequence    

Annotation

kegg
ID rcu:RCOM_0651660
description flavonoid 3-hydroxylase, putative (EC:1.14.13.88)
nr
ID XP_012068872.1
description PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
swissprot
ID P24465
description Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=2
trembl
ID A0A067L877
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24689 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 71a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36231: 383303-385235
cDNA
(Sanger)
(ID:Location)		 004_M15.ab1: 383303-384060 , 025_A06.ab1: 383303-384117 , 033_P05.ab1: 383303-384096 , 038_G19.ab1: 383303-384092 , 041_G11.ab1: 383303-384059 , 044_P12.ab1: 383303-384079 , 046_I06.ab1: 383303-384098 , 053_E01.ab1: 383303-384082

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000347_370 0.0 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
2 Hb_001168_100 0.0730742565 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Citrus sinensis]
3 Hb_004267_070 0.0788572023 - - latex allene oxide synthase [Hevea brasiliensis]
4 Hb_007383_050 0.0929489733 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF061 [Jatropha curcas]
5 Hb_011928_030 0.0995588143 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
6 Hb_007305_040 0.1007817344 - - Nodulin-26, putative [Ricinus communis]
7 Hb_133646_010 0.1047400815 - - hypothetical protein RCOM_1044030 [Ricinus communis]
8 Hb_004531_010 0.106743018 - - PREDICTED: ankyrin repeat-containing protein At2g01680-like [Jatropha curcas]
9 Hb_001411_150 0.1075084838 - - Dormancy/auxin associated family protein, putative [Theobroma cacao]
10 Hb_029866_140 0.1125286141 - - PREDICTED: hevamine-A [Jatropha curcas]
11 Hb_089140_020 0.1133780426 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
12 Hb_001437_200 0.1223242012 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
13 Hb_000172_300 0.1283335736 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
14 Hb_011054_030 0.1284635158 - - PREDICTED: uncharacterized protein LOC103324687 [Prunus mume]
15 Hb_000625_040 0.1364667843 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
16 Hb_000123_310 0.1389634571 - - PREDICTED: aquaporin TIP1-3 [Jatropha curcas]
17 Hb_027913_010 0.1394369004 - - ankyrin repeat-containing protein, putative [Ricinus communis]
18 Hb_000656_360 0.1409694805 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
19 Hb_008667_020 0.143086585 - - PREDICTED: uncharacterized protein LOC101299609 [Fragaria vesca subsp. vesca]
20 Hb_000210_150 0.1447781605 - - PREDICTED: protein YLS9-like [Jatropha curcas]

Gene co-expression network

sample Hb_000347_370 Hb_000347_370 Hb_001168_100 Hb_001168_100 Hb_000347_370--Hb_001168_100 Hb_004267_070 Hb_004267_070 Hb_000347_370--Hb_004267_070 Hb_007383_050 Hb_007383_050 Hb_000347_370--Hb_007383_050 Hb_011928_030 Hb_011928_030 Hb_000347_370--Hb_011928_030 Hb_007305_040 Hb_007305_040 Hb_000347_370--Hb_007305_040 Hb_133646_010 Hb_133646_010 Hb_000347_370--Hb_133646_010 Hb_001168_100--Hb_004267_070 Hb_001168_100--Hb_007383_050 Hb_089140_020 Hb_089140_020 Hb_001168_100--Hb_089140_020 Hb_001411_150 Hb_001411_150 Hb_001168_100--Hb_001411_150 Hb_002475_110 Hb_002475_110 Hb_001168_100--Hb_002475_110 Hb_004267_070--Hb_007383_050 Hb_004267_070--Hb_001411_150 Hb_000210_150 Hb_000210_150 Hb_004267_070--Hb_000210_150 Hb_004267_070--Hb_089140_020 Hb_007383_050--Hb_001411_150 Hb_009189_010 Hb_009189_010 Hb_007383_050--Hb_009189_010 Hb_007383_050--Hb_089140_020 Hb_002248_090 Hb_002248_090 Hb_011928_030--Hb_002248_090 Hb_024857_010 Hb_024857_010 Hb_011928_030--Hb_024857_010 Hb_001691_190 Hb_001691_190 Hb_011928_030--Hb_001691_190 Hb_000270_010 Hb_000270_010 Hb_011928_030--Hb_000270_010 Hb_011928_030--Hb_004267_070 Hb_000625_040 Hb_000625_040 Hb_007305_040--Hb_000625_040 Hb_002236_020 Hb_002236_020 Hb_007305_040--Hb_002236_020 Hb_007305_040--Hb_024857_010 Hb_004531_010 Hb_004531_010 Hb_007305_040--Hb_004531_010 Hb_000260_130 Hb_000260_130 Hb_007305_040--Hb_000260_130 Hb_176149_010 Hb_176149_010 Hb_133646_010--Hb_176149_010 Hb_000656_360 Hb_000656_360 Hb_133646_010--Hb_000656_360 Hb_004098_010 Hb_004098_010 Hb_133646_010--Hb_004098_010 Hb_027913_010 Hb_027913_010 Hb_133646_010--Hb_027913_010 Hb_001510_050 Hb_001510_050 Hb_133646_010--Hb_001510_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.100032 388.544 25.7556 71.4955 0.0773971 0.176564
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.102613 0 40.1591 5.18316

CAGE analysis