Hb_000358_170

Information

Type transcription factor
Description TF Family: ERF
Location Contig358: 196091-196852
Sequence    

Annotation

kegg
ID rcu:RCOM_1050490
description Transcriptional factor TINY, putative
nr
ID XP_012076774.1
description PREDICTED: ethylene-responsive transcription factor TINY-like [Jatropha curcas]
swissprot
ID Q9LYD3
description Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1
trembl
ID A0A067KC06
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07297 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000358_170 0.0 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor TINY-like [Jatropha curcas]
2 Hb_001257_120 0.0768547998 - - PREDICTED: probable CCR4-associated factor 1 homolog 9 [Jatropha curcas]
3 Hb_000127_200 0.0936512399 - - PREDICTED: uncharacterized protein LOC100255537 [Vitis vinifera]
4 Hb_010369_010 0.0972362844 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001198_170 0.1018851494 - - -
6 Hb_003209_120 0.1097174063 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
7 Hb_004079_040 0.11155328 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
8 Hb_172240_010 0.1303149031 - - PREDICTED: uncharacterized protein LOC105795660 [Gossypium raimondii]
9 Hb_000827_090 0.1309472046 - - PREDICTED: uncharacterized protein LOC103714121 [Phoenix dactylifera]
10 Hb_002811_320 0.1325481647 - - cation-transporting atpase plant, putative [Ricinus communis]
11 Hb_098175_010 0.1370488242 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
12 Hb_000777_020 0.1379776476 - - PREDICTED: 3-ketoacyl-CoA synthase 11 [Jatropha curcas]
13 Hb_155015_020 0.1382259856 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
14 Hb_000731_020 0.140608318 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
15 Hb_001213_140 0.1418207336 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
16 Hb_003071_040 0.1425625901 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
17 Hb_000925_110 0.1458232425 - - Spotted leaf protein, putative [Ricinus communis]
18 Hb_001894_060 0.1462430238 - - PREDICTED: uncharacterized protein LOC105644596 [Jatropha curcas]
19 Hb_000373_220 0.1496018888 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
20 Hb_053935_010 0.1501943685 - - hypothetical protein EUGRSUZ_G02294 [Eucalyptus grandis]

Gene co-expression network

sample Hb_000358_170 Hb_000358_170 Hb_001257_120 Hb_001257_120 Hb_000358_170--Hb_001257_120 Hb_000127_200 Hb_000127_200 Hb_000358_170--Hb_000127_200 Hb_010369_010 Hb_010369_010 Hb_000358_170--Hb_010369_010 Hb_001198_170 Hb_001198_170 Hb_000358_170--Hb_001198_170 Hb_003209_120 Hb_003209_120 Hb_000358_170--Hb_003209_120 Hb_004079_040 Hb_004079_040 Hb_000358_170--Hb_004079_040 Hb_001257_120--Hb_001198_170 Hb_172240_010 Hb_172240_010 Hb_001257_120--Hb_172240_010 Hb_002811_320 Hb_002811_320 Hb_001257_120--Hb_002811_320 Hb_155015_020 Hb_155015_020 Hb_001257_120--Hb_155015_020 Hb_098175_010 Hb_098175_010 Hb_001257_120--Hb_098175_010 Hb_000127_200--Hb_001198_170 Hb_002548_020 Hb_002548_020 Hb_000127_200--Hb_002548_020 Hb_000127_200--Hb_001257_120 Hb_004241_100 Hb_004241_100 Hb_000127_200--Hb_004241_100 Hb_001894_060 Hb_001894_060 Hb_000127_200--Hb_001894_060 Hb_000769_030 Hb_000769_030 Hb_010369_010--Hb_000769_030 Hb_128460_020 Hb_128460_020 Hb_010369_010--Hb_128460_020 Hb_014361_140 Hb_014361_140 Hb_010369_010--Hb_014361_140 Hb_053935_010 Hb_053935_010 Hb_010369_010--Hb_053935_010 Hb_011429_010 Hb_011429_010 Hb_010369_010--Hb_011429_010 Hb_158110_010 Hb_158110_010 Hb_010369_010--Hb_158110_010 Hb_001198_170--Hb_002811_320 Hb_001198_170--Hb_155015_020 Hb_001198_170--Hb_002548_020 Hb_003209_040 Hb_003209_040 Hb_003209_120--Hb_003209_040 Hb_001115_100 Hb_001115_100 Hb_003209_120--Hb_001115_100 Hb_027905_010 Hb_027905_010 Hb_003209_120--Hb_027905_010 Hb_000777_020 Hb_000777_020 Hb_003209_120--Hb_000777_020 Hb_003209_120--Hb_001257_120 Hb_158926_010 Hb_158926_010 Hb_004079_040--Hb_158926_010 Hb_101058_020 Hb_101058_020 Hb_004079_040--Hb_101058_020 Hb_004079_040--Hb_001894_060 Hb_004079_040--Hb_000127_200 Hb_000665_090 Hb_000665_090 Hb_004079_040--Hb_000665_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 46.2317 20.4992 37.1413 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.216078 1.47238 0 0.0918478 2.71451

CAGE analysis