Hb_000358_200

Information

Type -
Description -
Location Contig358: 238278-242860
Sequence    

Annotation

kegg
ID rcu:RCOM_1050480
description hypothetical protein
nr
ID XP_012076775.1
description PREDICTED: uncharacterized protein LOC105637771 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KC93
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07298 PE=4 SV=1
Gene Ontology
ID GO:0005622
description PREDICTED: uncharacterized protein LOC105637771

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36904: 237936-243080
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000358_200 0.0 - - PREDICTED: uncharacterized protein LOC105637771 [Jatropha curcas]
2 Hb_000122_220 0.0699556107 - - Prenylated Rab acceptor protein, putative [Ricinus communis]
3 Hb_001488_270 0.0900202344 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
4 Hb_003895_020 0.0921148014 - - PREDICTED: dedicator of cytokinesis protein 7 isoform X2 [Jatropha curcas]
5 Hb_044653_020 0.0921511993 transcription factor, desease resistance TF Family: GNAT, Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
6 Hb_005649_080 0.09445042 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
7 Hb_004659_090 0.0948982417 - - PREDICTED: uncharacterized protein LOC105629935 [Jatropha curcas]
8 Hb_003918_030 0.0963376968 - - PREDICTED: oxysterol-binding protein-related protein 1C-like isoform X1 [Jatropha curcas]
9 Hb_020805_150 0.0975782216 - - ubiquitin-protein ligase, putative [Ricinus communis]
10 Hb_011161_020 0.0983283381 - - PREDICTED: DIS3-like exonuclease 2 [Jatropha curcas]
11 Hb_006185_060 0.0991211707 - - PREDICTED: protein phosphatase 2C 16 [Jatropha curcas]
12 Hb_009302_030 0.1027282918 - - hypothetical protein RCOM_1176340 [Ricinus communis]
13 Hb_000265_090 0.10534534 - - PREDICTED: flowering time control protein FPA [Jatropha curcas]
14 Hb_005188_040 0.1058667708 - - PREDICTED: protein furry homolog-like [Nicotiana sylvestris]
15 Hb_006615_030 0.1059701467 - - prolyl oligopeptidase family protein [Populus trichocarpa]
16 Hb_003939_060 0.1059781203 - - conserved hypothetical protein [Ricinus communis]
17 Hb_008686_020 0.1060524212 - - PREDICTED: uncharacterized protein LOC105632277 isoform X1 [Jatropha curcas]
18 Hb_000179_190 0.106608807 transcription factor TF Family: Alfin-like PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Vitis vinifera]
19 Hb_170077_010 0.1067322954 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 [Jatropha curcas]
20 Hb_005403_010 0.1073125065 - - PREDICTED: exocyst complex component EXO70B1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000358_200 Hb_000358_200 Hb_000122_220 Hb_000122_220 Hb_000358_200--Hb_000122_220 Hb_001488_270 Hb_001488_270 Hb_000358_200--Hb_001488_270 Hb_003895_020 Hb_003895_020 Hb_000358_200--Hb_003895_020 Hb_044653_020 Hb_044653_020 Hb_000358_200--Hb_044653_020 Hb_005649_080 Hb_005649_080 Hb_000358_200--Hb_005649_080 Hb_004659_090 Hb_004659_090 Hb_000358_200--Hb_004659_090 Hb_000122_220--Hb_004659_090 Hb_006185_060 Hb_006185_060 Hb_000122_220--Hb_006185_060 Hb_011161_020 Hb_011161_020 Hb_000122_220--Hb_011161_020 Hb_001231_090 Hb_001231_090 Hb_000122_220--Hb_001231_090 Hb_002687_090 Hb_002687_090 Hb_000122_220--Hb_002687_090 Hb_000176_130 Hb_000176_130 Hb_001488_270--Hb_000176_130 Hb_000197_290 Hb_000197_290 Hb_001488_270--Hb_000197_290 Hb_000265_090 Hb_000265_090 Hb_001488_270--Hb_000265_090 Hb_007813_030 Hb_007813_030 Hb_001488_270--Hb_007813_030 Hb_002027_280 Hb_002027_280 Hb_001488_270--Hb_002027_280 Hb_000866_080 Hb_000866_080 Hb_003895_020--Hb_000866_080 Hb_004324_060 Hb_004324_060 Hb_003895_020--Hb_004324_060 Hb_001221_090 Hb_001221_090 Hb_003895_020--Hb_001221_090 Hb_030545_030 Hb_030545_030 Hb_003895_020--Hb_030545_030 Hb_002903_140 Hb_002903_140 Hb_003895_020--Hb_002903_140 Hb_155159_010 Hb_155159_010 Hb_003895_020--Hb_155159_010 Hb_012368_100 Hb_012368_100 Hb_044653_020--Hb_012368_100 Hb_000896_060 Hb_000896_060 Hb_044653_020--Hb_000896_060 Hb_004785_030 Hb_004785_030 Hb_044653_020--Hb_004785_030 Hb_000117_070 Hb_000117_070 Hb_044653_020--Hb_000117_070 Hb_005188_040 Hb_005188_040 Hb_044653_020--Hb_005188_040 Hb_002387_070 Hb_002387_070 Hb_044653_020--Hb_002387_070 Hb_002928_190 Hb_002928_190 Hb_005649_080--Hb_002928_190 Hb_001226_110 Hb_001226_110 Hb_005649_080--Hb_001226_110 Hb_170077_010 Hb_170077_010 Hb_005649_080--Hb_170077_010 Hb_020805_150 Hb_020805_150 Hb_005649_080--Hb_020805_150 Hb_000358_220 Hb_000358_220 Hb_005649_080--Hb_000358_220 Hb_003939_060 Hb_003939_060 Hb_005649_080--Hb_003939_060 Hb_000645_130 Hb_000645_130 Hb_004659_090--Hb_000645_130 Hb_004659_090--Hb_170077_010 Hb_000958_050 Hb_000958_050 Hb_004659_090--Hb_000958_050 Hb_000806_030 Hb_000806_030 Hb_004659_090--Hb_000806_030 Hb_009302_030 Hb_009302_030 Hb_004659_090--Hb_009302_030 Hb_000110_350 Hb_000110_350 Hb_004659_090--Hb_000110_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.3506 30.654 14.9655 15.7656 10.7386 12.3122
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.83633 3.67285 7.71939 7.35541 17.57

CAGE analysis