Hb_000359_310

Information

Type -
Description -
Location Contig359: 309150-311182
Sequence    

Annotation

kegg
ID pper:PRUPE_ppb006863mg
description hypothetical protein
nr
ID KDP39798.1
description hypothetical protein JCGZ_03934 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KXW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03934 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable sugar phosphate phosphate translocator at1g06470

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37071: 287255-310445 , PASA_asmbl_37072: 287255-310445
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000359_310 0.0 - - hypothetical protein JCGZ_03934 [Jatropha curcas]
2 Hb_000370_020 0.0823331463 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002289_060 0.0892136949 - - conserved hypothetical protein [Ricinus communis]
4 Hb_009661_030 0.0913042417 - - PREDICTED: SPX and EXS domain-containing protein 1-like [Jatropha curcas]
5 Hb_001946_180 0.0970527465 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000062_540 0.0977483359 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000256_150 0.1018835885 - - PREDICTED: trafficking protein particle complex II-specific subunit 120 homolog [Jatropha curcas]
8 Hb_000244_180 0.102281739 - - conserved hypothetical protein [Ricinus communis]
9 Hb_007765_040 0.1026002921 - - Cytosolic enolase isoform 3 [Theobroma cacao]
10 Hb_000917_130 0.1051686145 - - PREDICTED: uncharacterized protein LOC105635730 [Jatropha curcas]
11 Hb_001491_030 0.1055217852 - - PREDICTED: uncharacterized protein LOC105649804 isoform X1 [Jatropha curcas]
12 Hb_004055_120 0.1058494685 - - PREDICTED: uncharacterized protein LOC105631443 [Jatropha curcas]
13 Hb_000679_230 0.1098909598 - - PREDICTED: serine/threonine-protein kinase PRP4 homolog [Jatropha curcas]
14 Hb_001876_040 0.110571699 - - PREDICTED: mucin-5B [Jatropha curcas]
15 Hb_001512_040 0.1128581332 - - PREDICTED: probable methyltransferase PMT9 [Jatropha curcas]
16 Hb_000390_050 0.1129144063 - - PREDICTED: GPCR-type G protein 1 [Jatropha curcas]
17 Hb_000352_120 0.1130070081 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105630380 [Jatropha curcas]
18 Hb_003529_030 0.1130812529 - - Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]
19 Hb_004129_140 0.1132756665 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g06470 [Jatropha curcas]
20 Hb_003998_040 0.1138075359 - - organic anion transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_000359_310 Hb_000359_310 Hb_000370_020 Hb_000370_020 Hb_000359_310--Hb_000370_020 Hb_002289_060 Hb_002289_060 Hb_000359_310--Hb_002289_060 Hb_009661_030 Hb_009661_030 Hb_000359_310--Hb_009661_030 Hb_001946_180 Hb_001946_180 Hb_000359_310--Hb_001946_180 Hb_000062_540 Hb_000062_540 Hb_000359_310--Hb_000062_540 Hb_000256_150 Hb_000256_150 Hb_000359_310--Hb_000256_150 Hb_005023_010 Hb_005023_010 Hb_000370_020--Hb_005023_010 Hb_012395_170 Hb_012395_170 Hb_000370_020--Hb_012395_170 Hb_000370_020--Hb_000256_150 Hb_027380_220 Hb_027380_220 Hb_000370_020--Hb_027380_220 Hb_002495_080 Hb_002495_080 Hb_000370_020--Hb_002495_080 Hb_002289_060--Hb_000062_540 Hb_002289_060--Hb_001946_180 Hb_001157_230 Hb_001157_230 Hb_002289_060--Hb_001157_230 Hb_001876_040 Hb_001876_040 Hb_002289_060--Hb_001876_040 Hb_001916_090 Hb_001916_090 Hb_002289_060--Hb_001916_090 Hb_034585_010 Hb_034585_010 Hb_002289_060--Hb_034585_010 Hb_005800_030 Hb_005800_030 Hb_009661_030--Hb_005800_030 Hb_001104_130 Hb_001104_130 Hb_009661_030--Hb_001104_130 Hb_004129_140 Hb_004129_140 Hb_009661_030--Hb_004129_140 Hb_003878_200 Hb_003878_200 Hb_009661_030--Hb_003878_200 Hb_019181_030 Hb_019181_030 Hb_009661_030--Hb_019181_030 Hb_012651_010 Hb_012651_010 Hb_001946_180--Hb_012651_010 Hb_001842_010 Hb_001842_010 Hb_001946_180--Hb_001842_010 Hb_000049_020 Hb_000049_020 Hb_001946_180--Hb_000049_020 Hb_138585_080 Hb_138585_080 Hb_001946_180--Hb_138585_080 Hb_002226_080 Hb_002226_080 Hb_001946_180--Hb_002226_080 Hb_043792_040 Hb_043792_040 Hb_000062_540--Hb_043792_040 Hb_001936_130 Hb_001936_130 Hb_000062_540--Hb_001936_130 Hb_000352_120 Hb_000352_120 Hb_000062_540--Hb_000352_120 Hb_000062_540--Hb_004129_140 Hb_019181_040 Hb_019181_040 Hb_000062_540--Hb_019181_040 Hb_000256_150--Hb_000049_020 Hb_000300_270 Hb_000300_270 Hb_000256_150--Hb_000300_270 Hb_007481_010 Hb_007481_010 Hb_000256_150--Hb_007481_010 Hb_001269_330 Hb_001269_330 Hb_000256_150--Hb_001269_330 Hb_009569_040 Hb_009569_040 Hb_000256_150--Hb_009569_040 Hb_004452_110 Hb_004452_110 Hb_000256_150--Hb_004452_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.48272 2.91747 4.98105 13.2139 3.98253 4.88848
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.6228 4.18708 5.59966 3.02411 7.74132

CAGE analysis