Hb_000362_220

Information

Type -
Description -
Location Contig362: 212325-213665
Sequence    

Annotation

kegg
ID tcc:TCM_031668
description UDP-Glycosyltransferase superfamily protein
nr
ID XP_012092880.1
description PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
swissprot
ID Q66PF2
description Putative UDP-rhamnose:rhamnosyltransferase 1 OS=Fragaria ananassa GN=GT4 PE=2 SV=1
trembl
ID A0A061F7Z8
description UDP-Glycosyltransferase superfamily protein OS=Theobroma cacao GN=TCM_031668 PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37222: 212581-213085
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000362_220 0.0 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
2 Hb_001060_110 0.2005468809 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
3 Hb_005288_200 0.210986621 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
4 Hb_003321_010 0.2179125149 - - hypothetical protein RCOM_0884420 [Ricinus communis]
5 Hb_001277_270 0.2238211119 - - PREDICTED: ATP sulfurylase 1, chloroplastic [Jatropha curcas]
6 Hb_017434_060 0.2240312388 - - PREDICTED: 60S ribosomal export protein NMD3 [Jatropha curcas]
7 Hb_000703_240 0.2261545786 - - -
8 Hb_005396_050 0.2290522009 - - PREDICTED: phosphoenolpyruvate carboxylase 4 [Jatropha curcas]
9 Hb_073973_140 0.2302111715 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
10 Hb_002813_050 0.234856166 desease resistance Gene Name: TIR_2 PREDICTED: uncharacterized protein LOC105635699 [Jatropha curcas]
11 Hb_001959_040 0.2370556676 - - PREDICTED: beta-amylase 1, chloroplastic [Jatropha curcas]
12 Hb_000413_010 0.2380433763 - - hypothetical protein JCGZ_21316 [Jatropha curcas]
13 Hb_000005_330 0.2412967214 transcription factor TF Family: ARF PREDICTED: auxin response factor 6 isoform X2 [Jatropha curcas]
14 Hb_005396_070 0.2416572522 - - hypothetical protein EUGRSUZ_B03067 [Eucalyptus grandis]
15 Hb_116027_010 0.2417839599 - - PREDICTED: separase [Jatropha curcas]
16 Hb_001621_150 0.2422828723 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Jatropha curcas]
17 Hb_005565_010 0.2430027722 - - hypothetical protein CICLE_v10024612mg [Citrus clementina]
18 Hb_000859_060 0.2440756718 - - PREDICTED: uncharacterized protein LOC105641312 [Jatropha curcas]
19 Hb_004785_060 0.2449397455 - - PREDICTED: SKP1-interacting partner 15 [Jatropha curcas]
20 Hb_004204_170 0.2475808996 - - synaptosomal associated protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000362_220 Hb_000362_220 Hb_001060_110 Hb_001060_110 Hb_000362_220--Hb_001060_110 Hb_005288_200 Hb_005288_200 Hb_000362_220--Hb_005288_200 Hb_003321_010 Hb_003321_010 Hb_000362_220--Hb_003321_010 Hb_001277_270 Hb_001277_270 Hb_000362_220--Hb_001277_270 Hb_017434_060 Hb_017434_060 Hb_000362_220--Hb_017434_060 Hb_000703_240 Hb_000703_240 Hb_000362_220--Hb_000703_240 Hb_001060_110--Hb_001277_270 Hb_012395_220 Hb_012395_220 Hb_001060_110--Hb_012395_220 Hb_002813_050 Hb_002813_050 Hb_001060_110--Hb_002813_050 Hb_001621_150 Hb_001621_150 Hb_001060_110--Hb_001621_150 Hb_000261_490 Hb_000261_490 Hb_001060_110--Hb_000261_490 Hb_001060_110--Hb_003321_010 Hb_155396_010 Hb_155396_010 Hb_005288_200--Hb_155396_010 Hb_155702_010 Hb_155702_010 Hb_005288_200--Hb_155702_010 Hb_003203_020 Hb_003203_020 Hb_005288_200--Hb_003203_020 Hb_000525_010 Hb_000525_010 Hb_005288_200--Hb_000525_010 Hb_000011_190 Hb_000011_190 Hb_005288_200--Hb_000011_190 Hb_000032_620 Hb_000032_620 Hb_005288_200--Hb_000032_620 Hb_003321_010--Hb_001277_270 Hb_000856_190 Hb_000856_190 Hb_003321_010--Hb_000856_190 Hb_004324_300 Hb_004324_300 Hb_003321_010--Hb_004324_300 Hb_004204_170 Hb_004204_170 Hb_003321_010--Hb_004204_170 Hb_000983_090 Hb_000983_090 Hb_003321_010--Hb_000983_090 Hb_000859_060 Hb_000859_060 Hb_001277_270--Hb_000859_060 Hb_126643_020 Hb_126643_020 Hb_001277_270--Hb_126643_020 Hb_001277_270--Hb_004204_170 Hb_001178_140 Hb_001178_140 Hb_001277_270--Hb_001178_140 Hb_000085_100 Hb_000085_100 Hb_001277_270--Hb_000085_100 Hb_002085_110 Hb_002085_110 Hb_001277_270--Hb_002085_110 Hb_007307_030 Hb_007307_030 Hb_017434_060--Hb_007307_030 Hb_011311_020 Hb_011311_020 Hb_017434_060--Hb_011311_020 Hb_005702_030 Hb_005702_030 Hb_017434_060--Hb_005702_030 Hb_002007_240 Hb_002007_240 Hb_017434_060--Hb_002007_240 Hb_000987_140 Hb_000987_140 Hb_017434_060--Hb_000987_140 Hb_011344_170 Hb_011344_170 Hb_017434_060--Hb_011344_170 Hb_000497_180 Hb_000497_180 Hb_000703_240--Hb_000497_180 Hb_026698_010 Hb_026698_010 Hb_000703_240--Hb_026698_010 Hb_000050_090 Hb_000050_090 Hb_000703_240--Hb_000050_090 Hb_000640_300 Hb_000640_300 Hb_000703_240--Hb_000640_300 Hb_000703_240--Hb_005702_030 Hb_000589_400 Hb_000589_400 Hb_000703_240--Hb_000589_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.491081 0.478917 0.0581098 0.167844 0.168862 0.12086
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.320127 0.0559636 0.57563 0.145441 0

CAGE analysis