Hb_000363_010

Information

Type -
Description -
Location Contig363: 2129-4581
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000363_010 0.0 - - -
2 Hb_000934_030 0.1254303773 - - -
3 Hb_001143_090 0.1282399751 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 6 [Jatropha curcas]
4 Hb_003878_030 0.1337881012 - - hypothetical protein POPTR_0011s11120g [Populus trichocarpa]
5 Hb_042729_010 0.1380130277 - - -
6 Hb_002392_040 0.1493603436 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001153_200 0.1509452844 - - PREDICTED: calcium-dependent protein kinase 26 isoform X1 [Jatropha curcas]
8 Hb_002897_060 0.1542771272 - - PREDICTED: uncharacterized protein LOC105649233 [Jatropha curcas]
9 Hb_005618_040 0.1569599508 - - -
10 Hb_005867_040 0.1634175765 transcription factor TF Family: RWP-RK PREDICTED: protein RKD4 [Jatropha curcas]
11 Hb_004453_140 0.1637301089 - - PREDICTED: uncharacterized protein LOC104880181 [Vitis vinifera]
12 Hb_001349_010 0.1640510354 - - -
13 Hb_031403_010 0.1679852905 - - hypothetical protein POPTR_0001s40140g [Populus trichocarpa]
14 Hb_012660_020 0.1696547497 - - -
15 Hb_004882_020 0.1713222562 - - -
16 Hb_000733_030 0.1717111924 - - PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica]
17 Hb_004907_130 0.1731673815 - - -
18 Hb_000749_250 0.1758016705 - - PREDICTED: lanC-like protein GCR2 [Jatropha curcas]
19 Hb_002936_050 0.1760598407 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR18 isoform X2 [Jatropha curcas]
20 Hb_096225_020 0.1766814294 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT22-like [Jatropha curcas]

Gene co-expression network

sample Hb_000363_010 Hb_000363_010 Hb_000934_030 Hb_000934_030 Hb_000363_010--Hb_000934_030 Hb_001143_090 Hb_001143_090 Hb_000363_010--Hb_001143_090 Hb_003878_030 Hb_003878_030 Hb_000363_010--Hb_003878_030 Hb_042729_010 Hb_042729_010 Hb_000363_010--Hb_042729_010 Hb_002392_040 Hb_002392_040 Hb_000363_010--Hb_002392_040 Hb_001153_200 Hb_001153_200 Hb_000363_010--Hb_001153_200 Hb_001349_010 Hb_001349_010 Hb_000934_030--Hb_001349_010 Hb_000934_030--Hb_042729_010 Hb_004882_020 Hb_004882_020 Hb_000934_030--Hb_004882_020 Hb_002936_050 Hb_002936_050 Hb_000934_030--Hb_002936_050 Hb_005618_040 Hb_005618_040 Hb_000934_030--Hb_005618_040 Hb_000749_250 Hb_000749_250 Hb_001143_090--Hb_000749_250 Hb_004453_140 Hb_004453_140 Hb_001143_090--Hb_004453_140 Hb_001143_090--Hb_002392_040 Hb_001278_050 Hb_001278_050 Hb_001143_090--Hb_001278_050 Hb_003943_030 Hb_003943_030 Hb_001143_090--Hb_003943_030 Hb_012660_020 Hb_012660_020 Hb_003878_030--Hb_012660_020 Hb_000436_010 Hb_000436_010 Hb_003878_030--Hb_000436_010 Hb_000723_160 Hb_000723_160 Hb_003878_030--Hb_000723_160 Hb_001150_030 Hb_001150_030 Hb_003878_030--Hb_001150_030 Hb_002138_010 Hb_002138_010 Hb_003878_030--Hb_002138_010 Hb_004206_030 Hb_004206_030 Hb_042729_010--Hb_004206_030 Hb_042729_010--Hb_002936_050 Hb_012725_110 Hb_012725_110 Hb_042729_010--Hb_012725_110 Hb_000419_040 Hb_000419_040 Hb_042729_010--Hb_000419_040 Hb_000003_840 Hb_000003_840 Hb_042729_010--Hb_000003_840 Hb_000983_100 Hb_000983_100 Hb_002392_040--Hb_000983_100 Hb_002897_060 Hb_002897_060 Hb_002392_040--Hb_002897_060 Hb_007229_060 Hb_007229_060 Hb_002392_040--Hb_007229_060 Hb_026988_020 Hb_026988_020 Hb_002392_040--Hb_026988_020 Hb_005000_290 Hb_005000_290 Hb_002392_040--Hb_005000_290 Hb_001366_220 Hb_001366_220 Hb_002392_040--Hb_001366_220 Hb_001153_200--Hb_005618_040 Hb_007666_020 Hb_007666_020 Hb_001153_200--Hb_007666_020 Hb_025087_010 Hb_025087_010 Hb_001153_200--Hb_025087_010 Hb_009026_050 Hb_009026_050 Hb_001153_200--Hb_009026_050 Hb_002471_160 Hb_002471_160 Hb_001153_200--Hb_002471_160 Hb_001153_200--Hb_000934_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.131446 0.0665867 0 0 0.226764 0.167079
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.37891 0.357479 0.427457 0.145159 0

CAGE analysis