Hb_000363_120

Information

Type transcription factor
Description TF Family: WRKY
Location Contig363: 84176-90976
Sequence    

Annotation

kegg
ID rcu:RCOM_0047180
description WRKY transcription factor, putative
nr
ID XP_012070967.1
description PREDICTED: probable WRKY transcription factor 20 [Jatropha curcas]
swissprot
ID Q93WV0
description Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1
trembl
ID M9TMC3
description Uncharacterized protein OS=Jatropha curcas GN=WRKY09 PE=4 SV=1
Gene Ontology
ID GO:0003700
description probable wrky transcription factor 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37277: 84198-90785 , PASA_asmbl_37278: 90001-90243
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000363_120 0.0 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 20 [Jatropha curcas]
2 Hb_000094_090 0.0462273769 - - PREDICTED: DUF21 domain-containing protein At1g47330 isoform X1 [Jatropha curcas]
3 Hb_000809_160 0.0604167356 - - hypothetical protein JCGZ_12355 [Jatropha curcas]
4 Hb_031641_010 0.0649005164 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000340_030 0.0650113536 - - PREDICTED: myosin heavy chain, non-muscle-like [Jatropha curcas]
6 Hb_004899_040 0.0652018597 transcription factor TF Family: ARF Auxin response factor [Medicago truncatula]
7 Hb_001545_150 0.0662175618 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105635527 [Jatropha curcas]
8 Hb_001723_010 0.0690611214 - - PREDICTED: E3 ubiquitin-protein ligase UPL6 [Jatropha curcas]
9 Hb_000940_200 0.0691968068 - - PREDICTED: uncharacterized protein LOC105643779 [Jatropha curcas]
10 Hb_005389_160 0.0704500147 - - PREDICTED: casein kinase I [Jatropha curcas]
11 Hb_000205_240 0.0717099572 - - ubiquitin-protein ligase, putative [Ricinus communis]
12 Hb_004517_020 0.0726189682 - - PREDICTED: probable ubiquitin-like-specific protease 2B isoform X1 [Jatropha curcas]
13 Hb_000373_230 0.0733019348 transcription factor TF Family: TUB phosphoric diester hydrolase, putative [Ricinus communis]
14 Hb_000069_130 0.0738507905 - - PREDICTED: uncharacterized protein LOC105642829 isoform X1 [Jatropha curcas]
15 Hb_000703_200 0.0741924943 - - PREDICTED: ATP-dependent RNA helicase DHX36-like isoform X1 [Jatropha curcas]
16 Hb_003398_080 0.075824385 - - PREDICTED: telomere repeat-binding protein 4 isoform X3 [Jatropha curcas]
17 Hb_000120_910 0.07656563 - - plant ubiquilin, putative [Ricinus communis]
18 Hb_000809_170 0.0770998365 - - PREDICTED: guanine nucleotide-binding protein subunit beta-like protein 1 homolog isoform X1 [Jatropha curcas]
19 Hb_001300_010 0.0776081355 transcription factor TF Family: C3H nucleic acid binding protein, putative [Ricinus communis]
20 Hb_003866_080 0.0792332855 - - PREDICTED: uncharacterized protein LOC105639150 [Jatropha curcas]

Gene co-expression network

sample Hb_000363_120 Hb_000363_120 Hb_000094_090 Hb_000094_090 Hb_000363_120--Hb_000094_090 Hb_000809_160 Hb_000809_160 Hb_000363_120--Hb_000809_160 Hb_031641_010 Hb_031641_010 Hb_000363_120--Hb_031641_010 Hb_000340_030 Hb_000340_030 Hb_000363_120--Hb_000340_030 Hb_004899_040 Hb_004899_040 Hb_000363_120--Hb_004899_040 Hb_001545_150 Hb_001545_150 Hb_000363_120--Hb_001545_150 Hb_000094_090--Hb_000809_160 Hb_000723_110 Hb_000723_110 Hb_000094_090--Hb_000723_110 Hb_000373_230 Hb_000373_230 Hb_000094_090--Hb_000373_230 Hb_023226_070 Hb_023226_070 Hb_000094_090--Hb_023226_070 Hb_004870_050 Hb_004870_050 Hb_000094_090--Hb_004870_050 Hb_002477_250 Hb_002477_250 Hb_000809_160--Hb_002477_250 Hb_000809_160--Hb_031641_010 Hb_000866_450 Hb_000866_450 Hb_000809_160--Hb_000866_450 Hb_000120_910 Hb_000120_910 Hb_000809_160--Hb_000120_910 Hb_031641_010--Hb_000340_030 Hb_002849_170 Hb_002849_170 Hb_031641_010--Hb_002849_170 Hb_001723_010 Hb_001723_010 Hb_031641_010--Hb_001723_010 Hb_000529_060 Hb_000529_060 Hb_031641_010--Hb_000529_060 Hb_004204_130 Hb_004204_130 Hb_031641_010--Hb_004204_130 Hb_000340_030--Hb_001723_010 Hb_000139_320 Hb_000139_320 Hb_000340_030--Hb_000139_320 Hb_000340_030--Hb_002849_170 Hb_003711_010 Hb_003711_010 Hb_000340_030--Hb_003711_010 Hb_000340_030--Hb_000529_060 Hb_011249_060 Hb_011249_060 Hb_004899_040--Hb_011249_060 Hb_009302_030 Hb_009302_030 Hb_004899_040--Hb_009302_030 Hb_004899_040--Hb_000094_090 Hb_000649_250 Hb_000649_250 Hb_004899_040--Hb_000649_250 Hb_000703_200 Hb_000703_200 Hb_004899_040--Hb_000703_200 Hb_000479_070 Hb_000479_070 Hb_001545_150--Hb_000479_070 Hb_001089_050 Hb_001089_050 Hb_001545_150--Hb_001089_050 Hb_031042_050 Hb_031042_050 Hb_001545_150--Hb_031042_050 Hb_000402_230 Hb_000402_230 Hb_001545_150--Hb_000402_230 Hb_003918_030 Hb_003918_030 Hb_001545_150--Hb_003918_030 Hb_001279_120 Hb_001279_120 Hb_001545_150--Hb_001279_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.19153 23.0241 13.1313 11.6484 8.83519 7.66308
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.21182 8.84044 7.2761 11.3552 8.39444

CAGE analysis