Hb_000363_210

Information

Type -
Description -
Location Contig363: 160542-164803
Sequence    

Annotation

kegg
ID rcu:RCOM_0046290
description Calcium-binding protein, putative
nr
ID XP_012070942.1
description PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
swissprot
ID Q9FGK3
description Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1
trembl
ID A0A067KW95
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00975 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000363_210 0.0 - - PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
2 Hb_022256_020 0.1085427829 - - PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Jatropha curcas]
3 Hb_001189_140 0.1096067439 - - -
4 Hb_000983_090 0.1109366168 - - PREDICTED: mitogen-activated protein kinase homolog NTF3 [Jatropha curcas]
5 Hb_001104_170 0.1125850808 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-2c [Jatropha curcas]
6 Hb_002217_170 0.1170128359 - - PREDICTED: E3 ubiquitin-protein ligase UPL6-like isoform X1 [Gossypium raimondii]
7 Hb_003082_010 0.117983842 - - PREDICTED: putative F-box protein At3g10240 [Jatropha curcas]
8 Hb_003752_100 0.1182030873 - - PREDICTED: FRIGIDA-like protein 3 [Jatropha curcas]
9 Hb_012055_060 0.1194434889 - - PREDICTED: uncharacterized protein LOC105639799 isoform X1 [Jatropha curcas]
10 Hb_002900_090 0.1212024951 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105646817 [Jatropha curcas]
11 Hb_033772_030 0.1218342092 - - PREDICTED: CST complex subunit CTC1 [Jatropha curcas]
12 Hb_001825_060 0.1218483383 - - PREDICTED: F-box/kelch-repeat protein OR23 [Jatropha curcas]
13 Hb_000987_060 0.1222418721 - - PREDICTED: BRCA1-A complex subunit Abraxas [Jatropha curcas]
14 Hb_006588_210 0.1239202655 - - PREDICTED: E3 ubiquitin-protein ligase Hakai [Jatropha curcas]
15 Hb_000484_130 0.1239278656 - - splicing factor, putative [Ricinus communis]
16 Hb_003657_010 0.1241273581 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000071_070 0.1248877617 - - PREDICTED: U-box domain-containing protein 33-like [Jatropha curcas]
18 Hb_000014_050 0.1262995763 - - PREDICTED: V-type proton ATPase subunit B 2 [Elaeis guineensis]
19 Hb_007765_110 0.1273812483 - - PREDICTED: zinc finger CCCH domain-containing protein 40-like [Jatropha curcas]
20 Hb_000260_180 0.1294341741 - - PREDICTED: KH domain-containing protein At2g38610 [Jatropha curcas]

Gene co-expression network

sample Hb_000363_210 Hb_000363_210 Hb_022256_020 Hb_022256_020 Hb_000363_210--Hb_022256_020 Hb_001189_140 Hb_001189_140 Hb_000363_210--Hb_001189_140 Hb_000983_090 Hb_000983_090 Hb_000363_210--Hb_000983_090 Hb_001104_170 Hb_001104_170 Hb_000363_210--Hb_001104_170 Hb_002217_170 Hb_002217_170 Hb_000363_210--Hb_002217_170 Hb_003082_010 Hb_003082_010 Hb_000363_210--Hb_003082_010 Hb_000484_130 Hb_000484_130 Hb_022256_020--Hb_000484_130 Hb_002675_130 Hb_002675_130 Hb_022256_020--Hb_002675_130 Hb_002234_090 Hb_002234_090 Hb_022256_020--Hb_002234_090 Hb_004916_010 Hb_004916_010 Hb_022256_020--Hb_004916_010 Hb_033772_030 Hb_033772_030 Hb_022256_020--Hb_033772_030 Hb_002818_030 Hb_002818_030 Hb_022256_020--Hb_002818_030 Hb_001892_020 Hb_001892_020 Hb_001189_140--Hb_001892_020 Hb_003376_350 Hb_003376_350 Hb_001189_140--Hb_003376_350 Hb_165026_020 Hb_165026_020 Hb_001189_140--Hb_165026_020 Hb_010883_090 Hb_010883_090 Hb_001189_140--Hb_010883_090 Hb_000230_390 Hb_000230_390 Hb_001189_140--Hb_000230_390 Hb_000856_190 Hb_000856_190 Hb_000983_090--Hb_000856_190 Hb_002411_030 Hb_002411_030 Hb_000983_090--Hb_002411_030 Hb_012762_030 Hb_012762_030 Hb_000983_090--Hb_012762_030 Hb_004204_170 Hb_004204_170 Hb_000983_090--Hb_004204_170 Hb_012055_060 Hb_012055_060 Hb_000983_090--Hb_012055_060 Hb_000331_670 Hb_000331_670 Hb_000983_090--Hb_000331_670 Hb_000442_010 Hb_000442_010 Hb_001104_170--Hb_000442_010 Hb_005389_160 Hb_005389_160 Hb_001104_170--Hb_005389_160 Hb_001766_020 Hb_001766_020 Hb_001104_170--Hb_001766_020 Hb_000291_010 Hb_000291_010 Hb_001104_170--Hb_000291_010 Hb_000363_400 Hb_000363_400 Hb_001104_170--Hb_000363_400 Hb_001410_020 Hb_001410_020 Hb_001104_170--Hb_001410_020 Hb_003835_070 Hb_003835_070 Hb_002217_170--Hb_003835_070 Hb_001195_530 Hb_001195_530 Hb_002217_170--Hb_001195_530 Hb_000317_370 Hb_000317_370 Hb_002217_170--Hb_000317_370 Hb_003464_090 Hb_003464_090 Hb_002217_170--Hb_003464_090 Hb_105105_010 Hb_105105_010 Hb_002217_170--Hb_105105_010 Hb_000614_210 Hb_000614_210 Hb_002217_170--Hb_000614_210 Hb_000976_210 Hb_000976_210 Hb_003082_010--Hb_000976_210 Hb_004109_030 Hb_004109_030 Hb_003082_010--Hb_004109_030 Hb_008511_090 Hb_008511_090 Hb_003082_010--Hb_008511_090 Hb_002043_140 Hb_002043_140 Hb_003082_010--Hb_002043_140 Hb_003752_100 Hb_003752_100 Hb_003082_010--Hb_003752_100 Hb_002890_090 Hb_002890_090 Hb_003082_010--Hb_002890_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.944487 2.74889 1.60181 1.10919 1.34673 0.802349
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.5494 1.41122 2.38608 1.68324 0.530893

CAGE analysis