Hb_000363_240

Information

Type -
Description -
Location Contig363: 188885-192354
Sequence    

Annotation

kegg
ID rcu:RCOM_0046280
description Beta-(1,2)-xylosyltransferase, putative (EC:2.4.2.38)
nr
ID XP_012070943.1
description PREDICTED: beta-(1,2)-xylosyltransferase [Jatropha curcas]
swissprot
ID Q9LDH0
description Beta-(1,2)-xylosyltransferase OS=Arabidopsis thaliana GN=XYLT PE=1 SV=1
trembl
ID A0A067L588
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00976 PE=4 SV=1
Gene Ontology
ID GO:0000139
description beta-( )-xylosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37300: 188799-192398
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000363_240 0.0 - - PREDICTED: beta-(1,2)-xylosyltransferase [Jatropha curcas]
2 Hb_003504_030 0.0744406101 - - PREDICTED: serine/threonine-protein phosphatase PP1-like isoform X2 [Jatropha curcas]
3 Hb_001329_140 0.0831564881 - - PREDICTED: zinc finger protein 598 [Jatropha curcas]
4 Hb_001674_030 0.0841358802 - - PREDICTED: BTB/POZ domain-containing protein At2g24240 [Jatropha curcas]
5 Hb_007336_010 0.0846967789 - - PREDICTED: F-box protein At1g47056-like [Jatropha curcas]
6 Hb_003747_100 0.0856475967 - - PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Jatropha curcas]
7 Hb_007508_080 0.0861829265 - - PREDICTED: presenilin-like protein At2g29900 [Jatropha curcas]
8 Hb_001799_180 0.0891229403 - - PREDICTED: serine/threonine-protein kinase D6PK [Jatropha curcas]
9 Hb_000037_190 0.0893791573 - - PREDICTED: uncharacterized protein LOC105641500 [Jatropha curcas]
10 Hb_000120_130 0.0894090795 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 66 [Jatropha curcas]
11 Hb_000327_270 0.089983909 - - PREDICTED: leukocyte receptor cluster member 8 homolog isoform X1 [Jatropha curcas]
12 Hb_008253_030 0.0922381563 - - PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
13 Hb_000544_090 0.0925739677 - - PREDICTED: golgin candidate 2 [Jatropha curcas]
14 Hb_000479_220 0.0930258372 - - PREDICTED: uncharacterized protein LOC105644125 [Jatropha curcas]
15 Hb_000077_140 0.0931272267 - - structural constituent of cell wall, putative [Ricinus communis]
16 Hb_003168_110 0.0938153664 transcription factor TF Family: SWI/SNF-SWI3 PREDICTED: lysine-specific histone demethylase 1 homolog 1 [Jatropha curcas]
17 Hb_000684_250 0.0946645024 - - PREDICTED: uncharacterized protein LOC105642172 [Jatropha curcas]
18 Hb_000590_050 0.0947271089 - - PREDICTED: protein-tyrosine-phosphatase MKP1 [Jatropha curcas]
19 Hb_002843_120 0.0965759214 - - PREDICTED: uncharacterized protein LOC105645113 isoform X1 [Jatropha curcas]
20 Hb_000457_260 0.0972628285 - - PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000363_240 Hb_000363_240 Hb_003504_030 Hb_003504_030 Hb_000363_240--Hb_003504_030 Hb_001329_140 Hb_001329_140 Hb_000363_240--Hb_001329_140 Hb_001674_030 Hb_001674_030 Hb_000363_240--Hb_001674_030 Hb_007336_010 Hb_007336_010 Hb_000363_240--Hb_007336_010 Hb_003747_100 Hb_003747_100 Hb_000363_240--Hb_003747_100 Hb_007508_080 Hb_007508_080 Hb_000363_240--Hb_007508_080 Hb_000327_270 Hb_000327_270 Hb_003504_030--Hb_000327_270 Hb_000037_190 Hb_000037_190 Hb_003504_030--Hb_000037_190 Hb_001799_180 Hb_001799_180 Hb_003504_030--Hb_001799_180 Hb_013399_100 Hb_013399_100 Hb_003504_030--Hb_013399_100 Hb_002732_040 Hb_002732_040 Hb_003504_030--Hb_002732_040 Hb_001409_020 Hb_001409_020 Hb_003504_030--Hb_001409_020 Hb_000684_250 Hb_000684_250 Hb_001329_140--Hb_000684_250 Hb_003168_110 Hb_003168_110 Hb_001329_140--Hb_003168_110 Hb_000803_260 Hb_000803_260 Hb_001329_140--Hb_000803_260 Hb_001329_140--Hb_000037_190 Hb_000457_260 Hb_000457_260 Hb_001329_140--Hb_000457_260 Hb_000590_050 Hb_000590_050 Hb_001329_140--Hb_000590_050 Hb_007850_090 Hb_007850_090 Hb_001674_030--Hb_007850_090 Hb_000072_120 Hb_000072_120 Hb_001674_030--Hb_000072_120 Hb_000329_230 Hb_000329_230 Hb_001674_030--Hb_000329_230 Hb_003906_200 Hb_003906_200 Hb_001674_030--Hb_003906_200 Hb_000009_500 Hb_000009_500 Hb_001674_030--Hb_000009_500 Hb_000402_230 Hb_000402_230 Hb_001674_030--Hb_000402_230 Hb_001492_020 Hb_001492_020 Hb_007336_010--Hb_001492_020 Hb_002235_170 Hb_002235_170 Hb_007336_010--Hb_002235_170 Hb_001205_240 Hb_001205_240 Hb_007336_010--Hb_001205_240 Hb_007336_010--Hb_000327_270 Hb_001511_240 Hb_001511_240 Hb_007336_010--Hb_001511_240 Hb_000808_030 Hb_000808_030 Hb_003747_100--Hb_000808_030 Hb_000331_680 Hb_000331_680 Hb_003747_100--Hb_000331_680 Hb_000120_130 Hb_000120_130 Hb_003747_100--Hb_000120_130 Hb_000077_140 Hb_000077_140 Hb_003747_100--Hb_000077_140 Hb_003747_100--Hb_003504_030 Hb_000964_130 Hb_000964_130 Hb_003747_100--Hb_000964_130 Hb_004668_060 Hb_004668_060 Hb_007508_080--Hb_004668_060 Hb_008103_020 Hb_008103_020 Hb_007508_080--Hb_008103_020 Hb_000139_130 Hb_000139_130 Hb_007508_080--Hb_000139_130 Hb_001377_160 Hb_001377_160 Hb_007508_080--Hb_001377_160 Hb_004109_230 Hb_004109_230 Hb_007508_080--Hb_004109_230 Hb_005503_040 Hb_005503_040 Hb_007508_080--Hb_005503_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.8351 14.9065 6.29644 11.6901 7.86077 13.5059
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.354 5.73207 9.89792 6.90807 10.8859

CAGE analysis