Hb_000363_470

Information

Type -
Description -
Location Contig363: 411275-412759
Sequence    

Annotation

kegg
ID rcu:RCOM_0546610
description zinc finger protein, putative
nr
ID KDP39193.1
description hypothetical protein JCGZ_00950 [Jatropha curcas]
swissprot
ID Q8VY93
description GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1
trembl
ID A0A067KW49
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00950 PE=4 SV=1
Gene Ontology
ID GO:0016788
description gdsl esterase lipase at4g26790

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37345: 411853-412058
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000363_470 0.0 - - hypothetical protein JCGZ_00950 [Jatropha curcas]
2 Hb_001225_060 0.1423389513 - - BnaC03g58850D [Brassica napus]
3 Hb_020581_050 0.20083356 - - -
4 Hb_020581_020 0.2295297705 - - hypothetical protein B456_003G065300 [Gossypium raimondii]
5 Hb_181968_010 0.2330801574 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
6 Hb_144004_010 0.2441963143 - - hypothetical protein JCGZ_01009 [Jatropha curcas]
7 Hb_137695_010 0.2505308371 - - PREDICTED: wall-associated receptor kinase 2-like [Malus domestica]
8 Hb_000666_020 0.2583503929 - - Major latex protein, putative [Ricinus communis]
9 Hb_006475_020 0.259099061 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
10 Hb_019641_020 0.2601354532 - - hypothetical protein AALP_AAs49670U000100, partial [Arabis alpina]
11 Hb_108884_020 0.2625374546 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
12 Hb_001675_230 0.2626534924 - - scab resistance family protein [Populus trichocarpa]
13 Hb_000243_110 0.2646278044 - - PREDICTED: WAT1-related protein At3g53210-like [Jatropha curcas]
14 Hb_011552_020 0.2650224578 - - hypothetical protein F383_28301 [Gossypium arboreum]
15 Hb_000291_320 0.2650970178 - - Protein MLO, putative [Ricinus communis]
16 Hb_102011_010 0.2663095453 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
17 Hb_000177_120 0.2707865145 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
18 Hb_110218_010 0.2745018826 - - PREDICTED: uncharacterized protein LOC104428128 [Eucalyptus grandis]
19 Hb_000046_060 0.277765462 - - sugar transporter, putative [Ricinus communis]
20 Hb_002837_140 0.2780406228 - - hypothetical protein JCGZ_05022 [Jatropha curcas]

Gene co-expression network

sample Hb_000363_470 Hb_000363_470 Hb_001225_060 Hb_001225_060 Hb_000363_470--Hb_001225_060 Hb_020581_050 Hb_020581_050 Hb_000363_470--Hb_020581_050 Hb_020581_020 Hb_020581_020 Hb_000363_470--Hb_020581_020 Hb_181968_010 Hb_181968_010 Hb_000363_470--Hb_181968_010 Hb_144004_010 Hb_144004_010 Hb_000363_470--Hb_144004_010 Hb_137695_010 Hb_137695_010 Hb_000363_470--Hb_137695_010 Hb_000291_320 Hb_000291_320 Hb_001225_060--Hb_000291_320 Hb_001225_060--Hb_020581_050 Hb_102011_010 Hb_102011_010 Hb_001225_060--Hb_102011_010 Hb_000177_120 Hb_000177_120 Hb_001225_060--Hb_000177_120 Hb_004228_040 Hb_004228_040 Hb_001225_060--Hb_004228_040 Hb_011552_020 Hb_011552_020 Hb_020581_050--Hb_011552_020 Hb_108884_020 Hb_108884_020 Hb_020581_050--Hb_108884_020 Hb_006475_020 Hb_006475_020 Hb_020581_050--Hb_006475_020 Hb_001864_010 Hb_001864_010 Hb_020581_050--Hb_001864_010 Hb_029508_030 Hb_029508_030 Hb_020581_050--Hb_029508_030 Hb_000286_190 Hb_000286_190 Hb_020581_050--Hb_000286_190 Hb_020581_020--Hb_181968_010 Hb_000130_210 Hb_000130_210 Hb_020581_020--Hb_000130_210 Hb_002837_140 Hb_002837_140 Hb_020581_020--Hb_002837_140 Hb_000666_020 Hb_000666_020 Hb_020581_020--Hb_000666_020 Hb_020581_020--Hb_108884_020 Hb_020581_020--Hb_137695_010 Hb_181968_010--Hb_137695_010 Hb_181968_010--Hb_002837_140 Hb_181968_010--Hb_000666_020 Hb_181968_010--Hb_000130_210 Hb_135684_010 Hb_135684_010 Hb_181968_010--Hb_135684_010 Hb_005389_190 Hb_005389_190 Hb_144004_010--Hb_005389_190 Hb_003517_010 Hb_003517_010 Hb_144004_010--Hb_003517_010 Hb_112203_010 Hb_112203_010 Hb_144004_010--Hb_112203_010 Hb_001675_230 Hb_001675_230 Hb_144004_010--Hb_001675_230 Hb_144004_010--Hb_000666_020 Hb_137695_010--Hb_000666_020 Hb_137695_010--Hb_002837_140 Hb_015227_010 Hb_015227_010 Hb_137695_010--Hb_015227_010 Hb_137695_010--Hb_135684_010 Hb_001959_280 Hb_001959_280 Hb_137695_010--Hb_001959_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.103862 0 0 0.0182659 0.0417318
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.337564 0.0722206

CAGE analysis