Hb_000364_090

Information

Type -
Description -
Location Contig364: 103199-109685
Sequence    

Annotation

kegg
ID rcu:RCOM_1410590
description Myosin-9, putative
nr
ID XP_012079267.1
description PREDICTED: filament-like plant protein 7 isoform X2 [Jatropha curcas]
swissprot
ID Q9SLN1
description Filament-like plant protein 7 OS=Arabidopsis thaliana GN=FPP7 PE=3 SV=2
trembl
ID A0A067K776
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12428 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37446: 103241-103390 , PASA_asmbl_37447: 103402-109619 , PASA_asmbl_37448: 103418-109619
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000364_090 0.0 - - PREDICTED: filament-like plant protein 7 isoform X2 [Jatropha curcas]
2 Hb_004032_190 0.0521114161 - - PREDICTED: probable cellulose synthase A catalytic subunit 3 [UDP-forming] isoform X1 [Jatropha curcas]
3 Hb_000417_210 0.0625219617 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_000676_230 0.0797114062 - - PREDICTED: beta-galactosidase 3 [Jatropha curcas]
5 Hb_133974_010 0.0809568134 - - PREDICTED: glucan endo-1,3-beta-glucosidase 3-like isoform X2 [Populus euphratica]
6 Hb_001289_070 0.08144997 - - PREDICTED: protein YLS9-like [Jatropha curcas]
7 Hb_005711_030 0.0819415148 - - hypothetical protein RCOM_0460020 [Ricinus communis]
8 Hb_001512_130 0.0852494031 - - PREDICTED: uncharacterized protein LOC105633633 [Jatropha curcas]
9 Hb_001206_100 0.0932087575 - - hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
10 Hb_004650_110 0.0932488922 - - hypothetical protein POPTR_0002s08760g [Populus trichocarpa]
11 Hb_001268_150 0.0971605863 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
12 Hb_006242_050 0.097801799 - - Osmotin precursor, putative [Ricinus communis]
13 Hb_000368_050 0.0990833508 - - beta-galactosidase, putative [Ricinus communis]
14 Hb_007163_110 0.1020504401 - - PREDICTED: kinesin-like protein KIF19 [Jatropha curcas]
15 Hb_147006_010 0.1028068957 - - receptor like protein 35 [Arabidopsis thaliana]
16 Hb_000813_070 0.1028088443 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000903_040 0.1039588951 - - PREDICTED: pirin-like protein [Jatropha curcas]
18 Hb_000017_180 0.1040395474 - - hypothetical protein JCGZ_20551 [Jatropha curcas]
19 Hb_016277_030 0.1040531376 - - hypothetical protein JCGZ_16973 [Jatropha curcas]
20 Hb_000103_130 0.1060106592 - - PREDICTED: protein NETWORKED 1A [Jatropha curcas]

Gene co-expression network

sample Hb_000364_090 Hb_000364_090 Hb_004032_190 Hb_004032_190 Hb_000364_090--Hb_004032_190 Hb_000417_210 Hb_000417_210 Hb_000364_090--Hb_000417_210 Hb_000676_230 Hb_000676_230 Hb_000364_090--Hb_000676_230 Hb_133974_010 Hb_133974_010 Hb_000364_090--Hb_133974_010 Hb_001289_070 Hb_001289_070 Hb_000364_090--Hb_001289_070 Hb_005711_030 Hb_005711_030 Hb_000364_090--Hb_005711_030 Hb_016277_030 Hb_016277_030 Hb_004032_190--Hb_016277_030 Hb_001206_100 Hb_001206_100 Hb_004032_190--Hb_001206_100 Hb_009421_070 Hb_009421_070 Hb_004032_190--Hb_009421_070 Hb_004466_090 Hb_004466_090 Hb_004032_190--Hb_004466_090 Hb_000784_060 Hb_000784_060 Hb_004032_190--Hb_000784_060 Hb_000903_040 Hb_000903_040 Hb_000417_210--Hb_000903_040 Hb_138585_010 Hb_138585_010 Hb_000417_210--Hb_138585_010 Hb_000417_210--Hb_000676_230 Hb_004804_010 Hb_004804_010 Hb_000417_210--Hb_004804_010 Hb_012484_050 Hb_012484_050 Hb_000417_210--Hb_012484_050 Hb_004032_290 Hb_004032_290 Hb_000676_230--Hb_004032_290 Hb_010142_060 Hb_010142_060 Hb_000676_230--Hb_010142_060 Hb_000368_050 Hb_000368_050 Hb_000676_230--Hb_000368_050 Hb_000676_230--Hb_133974_010 Hb_004650_120 Hb_004650_120 Hb_000676_230--Hb_004650_120 Hb_002973_050 Hb_002973_050 Hb_133974_010--Hb_002973_050 Hb_133974_010--Hb_005711_030 Hb_004917_020 Hb_004917_020 Hb_133974_010--Hb_004917_020 Hb_147006_010 Hb_147006_010 Hb_133974_010--Hb_147006_010 Hb_133974_010--Hb_004032_290 Hb_001289_070--Hb_005711_030 Hb_015807_130 Hb_015807_130 Hb_001289_070--Hb_015807_130 Hb_005000_150 Hb_005000_150 Hb_001289_070--Hb_005000_150 Hb_003152_020 Hb_003152_020 Hb_001289_070--Hb_003152_020 Hb_000813_070 Hb_000813_070 Hb_001289_070--Hb_000813_070 Hb_002151_070 Hb_002151_070 Hb_001289_070--Hb_002151_070 Hb_005711_030--Hb_000813_070 Hb_000103_440 Hb_000103_440 Hb_005711_030--Hb_000103_440 Hb_005711_030--Hb_004650_120 Hb_000017_180 Hb_000017_180 Hb_005711_030--Hb_000017_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0631414 4.81104 13.8086 43.3214 0.0366423 0.0635601
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0872002 0.0257339 0.0494206 3.36702 32.5338

CAGE analysis