Hb_000364_160

Information

Type -
Description -
Location Contig364: 168038-170995
Sequence    

Annotation

kegg
ID rcu:RCOM_0550650
description hypothetical protein
nr
ID XP_012079289.1
description PREDICTED: uncharacterized protein LOC105639754 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KJG4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12440 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000364_160 0.0 - - PREDICTED: uncharacterized protein LOC105639754 [Jatropha curcas]
2 Hb_022593_010 0.211658642 - - PREDICTED: gamma aminobutyrate transaminase 3, chloroplastic [Jatropha curcas]
3 Hb_002783_110 0.215233559 - - Zeamatin precursor, putative [Ricinus communis]
4 Hb_006816_470 0.2158731641 - - PREDICTED: uncharacterized protein LOC105647469 isoform X1 [Jatropha curcas]
5 Hb_001242_080 0.2189404859 - - PREDICTED: UDP-galactose transporter 2-like [Populus euphratica]
6 Hb_026889_040 0.2221185184 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
7 Hb_002876_270 0.2236532042 - - PREDICTED: probable magnesium transporter NIPA4 isoform X1 [Jatropha curcas]
8 Hb_042202_060 0.2300224554 - - PREDICTED: probable glycosyltransferase At5g03795 [Jatropha curcas]
9 Hb_002320_080 0.2357873262 - - PREDICTED: MLO-like protein 13 isoform X2 [Jatropha curcas]
10 Hb_001142_010 0.2358746219 - - PREDICTED: alcohol dehydrogenase-like 6 [Jatropha curcas]
11 Hb_181026_010 0.2390312717 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
12 Hb_010422_070 0.2411705231 - - PREDICTED: UPF0483 protein CBG03338-like [Jatropha curcas]
13 Hb_005167_020 0.2421497508 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
14 Hb_000077_200 0.2422273144 - - PREDICTED: thioredoxin [Jatropha curcas]
15 Hb_008725_170 0.2422822736 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 11-like [Populus euphratica]
16 Hb_005167_030 0.2428408599 - - PREDICTED: serine/threonine-protein kinase At5g01020-like, partial [Camelina sativa]
17 Hb_000019_180 0.2454289144 transcription factor TF Family: SET Histone-lysine N-methyltransferase family protein [Populus trichocarpa]
18 Hb_033413_010 0.245862928 - - Reticuline oxidase precursor, putative [Ricinus communis]
19 Hb_130719_010 0.2475682684 - - V-type proton ATPase subunit E [Hevea brasiliensis]
20 Hb_013893_010 0.2504579062 - - neutral/alkaline invertase 3 [Hevea brasiliensis]

Gene co-expression network

sample Hb_000364_160 Hb_000364_160 Hb_022593_010 Hb_022593_010 Hb_000364_160--Hb_022593_010 Hb_002783_110 Hb_002783_110 Hb_000364_160--Hb_002783_110 Hb_006816_470 Hb_006816_470 Hb_000364_160--Hb_006816_470 Hb_001242_080 Hb_001242_080 Hb_000364_160--Hb_001242_080 Hb_026889_040 Hb_026889_040 Hb_000364_160--Hb_026889_040 Hb_002876_270 Hb_002876_270 Hb_000364_160--Hb_002876_270 Hb_158163_010 Hb_158163_010 Hb_022593_010--Hb_158163_010 Hb_004870_040 Hb_004870_040 Hb_022593_010--Hb_004870_040 Hb_000077_200 Hb_000077_200 Hb_022593_010--Hb_000077_200 Hb_022593_010--Hb_026889_040 Hb_000016_170 Hb_000016_170 Hb_022593_010--Hb_000016_170 Hb_001953_080 Hb_001953_080 Hb_022593_010--Hb_001953_080 Hb_029385_010 Hb_029385_010 Hb_002783_110--Hb_029385_010 Hb_002783_110--Hb_026889_040 Hb_000771_060 Hb_000771_060 Hb_002783_110--Hb_000771_060 Hb_002217_100 Hb_002217_100 Hb_002783_110--Hb_002217_100 Hb_130719_010 Hb_130719_010 Hb_002783_110--Hb_130719_010 Hb_028049_010 Hb_028049_010 Hb_002783_110--Hb_028049_010 Hb_008725_170 Hb_008725_170 Hb_006816_470--Hb_008725_170 Hb_006816_470--Hb_002876_270 Hb_008176_010 Hb_008176_010 Hb_006816_470--Hb_008176_010 Hb_000019_200 Hb_000019_200 Hb_006816_470--Hb_000019_200 Hb_006277_010 Hb_006277_010 Hb_006816_470--Hb_006277_010 Hb_000406_130 Hb_000406_130 Hb_006816_470--Hb_000406_130 Hb_000120_770 Hb_000120_770 Hb_001242_080--Hb_000120_770 Hb_002876_020 Hb_002876_020 Hb_001242_080--Hb_002876_020 Hb_001892_070 Hb_001892_070 Hb_001242_080--Hb_001892_070 Hb_002392_010 Hb_002392_010 Hb_001242_080--Hb_002392_010 Hb_003106_100 Hb_003106_100 Hb_001242_080--Hb_003106_100 Hb_001575_060 Hb_001575_060 Hb_001242_080--Hb_001575_060 Hb_003878_050 Hb_003878_050 Hb_026889_040--Hb_003878_050 Hb_000019_180 Hb_000019_180 Hb_026889_040--Hb_000019_180 Hb_004158_020 Hb_004158_020 Hb_026889_040--Hb_004158_020 Hb_091349_010 Hb_091349_010 Hb_026889_040--Hb_091349_010 Hb_000703_280 Hb_000703_280 Hb_026889_040--Hb_000703_280 Hb_011861_100 Hb_011861_100 Hb_026889_040--Hb_011861_100 Hb_000548_070 Hb_000548_070 Hb_002876_270--Hb_000548_070 Hb_002876_270--Hb_006277_010 Hb_003044_080 Hb_003044_080 Hb_002876_270--Hb_003044_080 Hb_021943_090 Hb_021943_090 Hb_002876_270--Hb_021943_090 Hb_006059_010 Hb_006059_010 Hb_002876_270--Hb_006059_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0856246 0.228909 0.0345115 0.0778663
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0420809 0.198605 0.36887 0.225547 0.27354

CAGE analysis