Hb_000364_180

Information

Type -
Description -
Location Contig364: 195605-201693
Sequence    

Annotation

kegg
ID rcu:RCOM_1410280
description phospholipase C, putative
nr
ID XP_012079258.1
description PREDICTED: PI-PLC X domain-containing protein At5g67130 [Jatropha curcas]
swissprot
ID Q93XX5
description PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1
trembl
ID A0A067K768
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12418 PE=4 SV=1
Gene Ontology
ID GO:0046658
description pi-plc x domain-containing protein at5g67130

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37461: 200568-200844
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000364_180 0.0 - - PREDICTED: PI-PLC X domain-containing protein At5g67130 [Jatropha curcas]
2 Hb_000997_090 0.0970589756 - - PREDICTED: uncharacterized protein LOC105632095 [Jatropha curcas]
3 Hb_000196_040 0.0980629309 - - Patellin-3, putative [Ricinus communis]
4 Hb_005730_030 0.1119351265 - - eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
5 Hb_000120_050 0.1129209525 - - PREDICTED: protein ELF4-LIKE 1 [Jatropha curcas]
6 Hb_000270_780 0.119141911 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Jatropha curcas]
7 Hb_042083_070 0.1219836408 - - Glycogen synthase kinase-3 beta, putative [Ricinus communis]
8 Hb_000490_030 0.1221695107 - - DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
9 Hb_000358_080 0.1238958368 - - Ribonuclease 3 [Gossypium arboreum]
10 Hb_006091_030 0.1246187305 desease resistance Gene Name: AAA PREDICTED: cell division control protein 48 homolog C-like isoform X1 [Jatropha curcas]
11 Hb_007943_080 0.1248904316 - - PREDICTED: cyclin-dependent kinase F-1 isoform X1 [Jatropha curcas]
12 Hb_000413_130 0.1273347758 - - PREDICTED: uncharacterized protein LOC105649409 [Jatropha curcas]
13 Hb_006400_040 0.1274441091 - - PREDICTED: uncharacterized protein LOC105642527 [Jatropha curcas]
14 Hb_153258_010 0.1279085976 - - PREDICTED: uncharacterized protein LOC105642325 [Jatropha curcas]
15 Hb_001057_010 0.1294123006 - - cation-transporting atpase plant, putative [Ricinus communis]
16 Hb_004055_040 0.12994978 - - Phospholipid-transporting ATPase, putative [Ricinus communis]
17 Hb_001001_060 0.1309056804 - - -
18 Hb_000340_510 0.1319223516 - - PREDICTED: serine/threonine-protein phosphatase BSL1 [Jatropha curcas]
19 Hb_002493_100 0.1328563784 - - PREDICTED: receptor-like protein kinase BRI1-like 3 [Jatropha curcas]
20 Hb_000619_080 0.1328956857 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 21 [Jatropha curcas]

Gene co-expression network

sample Hb_000364_180 Hb_000364_180 Hb_000997_090 Hb_000997_090 Hb_000364_180--Hb_000997_090 Hb_000196_040 Hb_000196_040 Hb_000364_180--Hb_000196_040 Hb_005730_030 Hb_005730_030 Hb_000364_180--Hb_005730_030 Hb_000120_050 Hb_000120_050 Hb_000364_180--Hb_000120_050 Hb_000270_780 Hb_000270_780 Hb_000364_180--Hb_000270_780 Hb_042083_070 Hb_042083_070 Hb_000364_180--Hb_042083_070 Hb_156850_030 Hb_156850_030 Hb_000997_090--Hb_156850_030 Hb_010080_060 Hb_010080_060 Hb_000997_090--Hb_010080_060 Hb_000032_320 Hb_000032_320 Hb_000997_090--Hb_000032_320 Hb_000077_070 Hb_000077_070 Hb_000997_090--Hb_000077_070 Hb_004055_040 Hb_004055_040 Hb_000997_090--Hb_004055_040 Hb_000196_040--Hb_042083_070 Hb_000413_130 Hb_000413_130 Hb_000196_040--Hb_000413_130 Hb_000196_040--Hb_000997_090 Hb_001439_180 Hb_001439_180 Hb_000196_040--Hb_001439_180 Hb_000367_290 Hb_000367_290 Hb_000196_040--Hb_000367_290 Hb_005730_030--Hb_004055_040 Hb_140171_010 Hb_140171_010 Hb_005730_030--Hb_140171_010 Hb_000244_250 Hb_000244_250 Hb_005730_030--Hb_000244_250 Hb_002928_060 Hb_002928_060 Hb_005730_030--Hb_002928_060 Hb_022408_010 Hb_022408_010 Hb_005730_030--Hb_022408_010 Hb_004204_080 Hb_004204_080 Hb_005730_030--Hb_004204_080 Hb_007943_080 Hb_007943_080 Hb_000120_050--Hb_007943_080 Hb_153258_010 Hb_153258_010 Hb_000120_050--Hb_153258_010 Hb_007558_140 Hb_007558_140 Hb_000120_050--Hb_007558_140 Hb_000358_080 Hb_000358_080 Hb_000120_050--Hb_000358_080 Hb_010863_080 Hb_010863_080 Hb_000120_050--Hb_010863_080 Hb_003297_030 Hb_003297_030 Hb_000120_050--Hb_003297_030 Hb_165350_010 Hb_165350_010 Hb_000270_780--Hb_165350_010 Hb_000270_780--Hb_156850_030 Hb_001728_100 Hb_001728_100 Hb_000270_780--Hb_001728_100 Hb_000270_780--Hb_004204_080 Hb_008643_060 Hb_008643_060 Hb_000270_780--Hb_008643_060 Hb_001057_010 Hb_001057_010 Hb_000270_780--Hb_001057_010 Hb_002725_070 Hb_002725_070 Hb_042083_070--Hb_002725_070 Hb_005295_040 Hb_005295_040 Hb_042083_070--Hb_005295_040 Hb_000462_150 Hb_000462_150 Hb_042083_070--Hb_000462_150 Hb_005914_230 Hb_005914_230 Hb_042083_070--Hb_005914_230 Hb_003384_030 Hb_003384_030 Hb_042083_070--Hb_003384_030 Hb_004310_060 Hb_004310_060 Hb_042083_070--Hb_004310_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
31.6005 13.5735 3.10446 6.56244 35.4015 19.0382
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.1488 6.3737 26.9843 11.9625 3.15912

CAGE analysis