Hb_000364_200

Information

Type -
Description -
Location Contig364: 205914-213521
Sequence    

Annotation

kegg
ID rcu:RCOM_1410150
description o-methyltransferase, putative (EC:2.1.1.104)
nr
ID XP_002523619.1
description o-methyltransferase, putative [Ricinus communis]
swissprot
ID O24150
description Caffeoyl-CoA O-methyltransferase 3 OS=Nicotiana tabacum GN=CCOAOMT3 PE=2 SV=2
trembl
ID B9SCA0
description O-methyltransferase, putative OS=Ricinus communis GN=RCOM_1410150 PE=4 SV=1
Gene Ontology
ID GO:0044237
description caffeoyl- o-methyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37463: 212272-213094
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000364_200 0.0 - - o-methyltransferase, putative [Ricinus communis]
2 Hb_011214_120 0.1701289925 - - PREDICTED: uncharacterized protein LOC105636139 [Jatropha curcas]
3 Hb_000589_210 0.2074138199 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
4 Hb_014834_020 0.2228583008 - - PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
5 Hb_000915_070 0.2305971496 - - ATP binding protein, putative [Ricinus communis]
6 Hb_001959_030 0.2321172932 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000056_220 0.2376296862 - - PREDICTED: HVA22-like protein c [Jatropha curcas]
8 Hb_001005_180 0.239208898 - - hypothetical protein Csa_5G464830 [Cucumis sativus]
9 Hb_000204_030 0.2403520554 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
10 Hb_001863_200 0.2403746926 - - chloroplast 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Hevea brasiliensis]
11 Hb_080147_060 0.2420868532 - - PREDICTED: cyclin-dependent kinase F-1 isoform X1 [Jatropha curcas]
12 Hb_002046_100 0.2455221312 transcription factor TF Family: MYB PREDICTED: transcription factor MYB82 [Jatropha curcas]
13 Hb_006588_030 0.2474085347 - - PREDICTED: cytochrome P450 CYP72A219-like [Jatropha curcas]
14 Hb_004445_090 0.2486746252 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001268_330 0.2570821988 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
16 Hb_000958_030 0.2591187186 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
17 Hb_003025_010 0.2599108853 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2 [Populus euphratica]
18 Hb_001104_200 0.2620772134 - - Phytosulfokine 3 precursor, putative [Theobroma cacao]
19 Hb_000466_150 0.26488712 - - hypothetical protein JCGZ_02123 [Jatropha curcas]
20 Hb_000544_100 0.2649031499 - - hypothetical protein JCGZ_03636 [Jatropha curcas]

Gene co-expression network

sample Hb_000364_200 Hb_000364_200 Hb_011214_120 Hb_011214_120 Hb_000364_200--Hb_011214_120 Hb_000589_210 Hb_000589_210 Hb_000364_200--Hb_000589_210 Hb_014834_020 Hb_014834_020 Hb_000364_200--Hb_014834_020 Hb_000915_070 Hb_000915_070 Hb_000364_200--Hb_000915_070 Hb_001959_030 Hb_001959_030 Hb_000364_200--Hb_001959_030 Hb_000056_220 Hb_000056_220 Hb_000364_200--Hb_000056_220 Hb_011214_120--Hb_001959_030 Hb_011214_120--Hb_000589_210 Hb_098030_010 Hb_098030_010 Hb_011214_120--Hb_098030_010 Hb_002016_020 Hb_002016_020 Hb_011214_120--Hb_002016_020 Hb_011214_120--Hb_014834_020 Hb_002597_010 Hb_002597_010 Hb_000589_210--Hb_002597_010 Hb_025254_020 Hb_025254_020 Hb_000589_210--Hb_025254_020 Hb_080147_060 Hb_080147_060 Hb_000589_210--Hb_080147_060 Hb_007545_140 Hb_007545_140 Hb_000589_210--Hb_007545_140 Hb_000589_210--Hb_001959_030 Hb_014834_020--Hb_080147_060 Hb_014834_020--Hb_000589_210 Hb_014834_020--Hb_001959_030 Hb_000041_290 Hb_000041_290 Hb_014834_020--Hb_000041_290 Hb_000915_070--Hb_025254_020 Hb_000915_070--Hb_001959_030 Hb_000098_310 Hb_000098_310 Hb_000915_070--Hb_000098_310 Hb_009823_010 Hb_009823_010 Hb_000915_070--Hb_009823_010 Hb_000915_070--Hb_002597_010 Hb_000580_070 Hb_000580_070 Hb_000915_070--Hb_000580_070 Hb_002042_200 Hb_002042_200 Hb_001959_030--Hb_002042_200 Hb_001959_030--Hb_025254_020 Hb_001959_030--Hb_002016_020 Hb_018133_110 Hb_018133_110 Hb_001959_030--Hb_018133_110 Hb_001369_620 Hb_001369_620 Hb_001959_030--Hb_001369_620 Hb_000175_480 Hb_000175_480 Hb_001959_030--Hb_000175_480 Hb_006275_010 Hb_006275_010 Hb_000056_220--Hb_006275_010 Hb_000471_080 Hb_000471_080 Hb_000056_220--Hb_000471_080 Hb_000056_220--Hb_007545_140 Hb_003602_070 Hb_003602_070 Hb_000056_220--Hb_003602_070 Hb_000056_220--Hb_000915_070 Hb_003893_140 Hb_003893_140 Hb_000056_220--Hb_003893_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.73413 0.50514 1.35473 2.51609 0.406951 0.758989
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0456194 0.0358823 0.19919 12.8177 0.0738311

CAGE analysis