Hb_000364_210

Information

Type -
Description -
Location Contig364: 224573-224797
Sequence    

Annotation

kegg
ID rcu:RCOM_1410030
description Mitochondrial import receptor subunit TOM7-1, putative
nr
ID XP_002523617.1
description Mitochondrial import receptor subunit TOM7-1, putative [Ricinus communis]
swissprot
ID Q9ASY8
description Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana GN=TOM7-1 PE=1 SV=1
trembl
ID B9SC98
description Mitochondrial import receptor subunit TOM7-1, putative OS=Ricinus communis GN=RCOM_1410030 PE=4 SV=1
Gene Ontology
ID GO:0005742
description mitochondrial import receptor subunit tom7-1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37464: 224304-224854
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000364_210 0.0 - - Mitochondrial import receptor subunit TOM7-1, putative [Ricinus communis]
2 Hb_001862_100 0.1086249131 - - PREDICTED: uncharacterized protein LOC105639799 isoform X2 [Jatropha curcas]
3 Hb_002719_080 0.1096407807 - - hypothetical protein POPTR_0006s27920g [Populus trichocarpa]
4 Hb_000648_020 0.116806772 - - PREDICTED: chaperone protein dnaJ 10-like [Jatropha curcas]
5 Hb_003938_180 0.1216008933 - - lesion inducing family protein [Populus trichocarpa]
6 Hb_002539_090 0.1268985921 - - PREDICTED: uncharacterized protein LOC103489178 [Cucumis melo]
7 Hb_003929_120 0.1270670691 - - PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Jatropha curcas]
8 Hb_010812_010 0.1279479787 - - hypothetical protein JCGZ_03306 [Jatropha curcas]
9 Hb_000224_090 0.1286548933 - - Eukaryotic translation initiation factor 1A [Gossypium arboreum]
10 Hb_012265_010 0.130235148 - - hypothetical protein CISIN_1g026883mg [Citrus sinensis]
11 Hb_003994_040 0.1308771651 - - -
12 Hb_002471_080 0.131072895 - - oxidoreductase, putative [Ricinus communis]
13 Hb_003623_050 0.1311216786 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000363_200 0.1312999029 - - 40S ribosomal protein S8, putative [Ricinus communis]
15 Hb_005474_060 0.1314653084 - - hypothetical protein PHAVU_011G019700g [Phaseolus vulgaris]
16 Hb_000236_150 0.1315071786 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
17 Hb_005841_050 0.1343684904 - - PREDICTED: F-box protein SKIP1-like [Jatropha curcas]
18 Hb_003398_120 0.1344068471 - - PREDICTED: uncharacterized protein LOC105641067 [Jatropha curcas]
19 Hb_001863_400 0.1346237399 - - hypothetical protein EUGRSUZ_F03302 [Eucalyptus grandis]
20 Hb_001141_030 0.1346452317 - - hypothetical protein PRUPE_ppa024854mg [Prunus persica]

Gene co-expression network

sample Hb_000364_210 Hb_000364_210 Hb_001862_100 Hb_001862_100 Hb_000364_210--Hb_001862_100 Hb_002719_080 Hb_002719_080 Hb_000364_210--Hb_002719_080 Hb_000648_020 Hb_000648_020 Hb_000364_210--Hb_000648_020 Hb_003938_180 Hb_003938_180 Hb_000364_210--Hb_003938_180 Hb_002539_090 Hb_002539_090 Hb_000364_210--Hb_002539_090 Hb_003929_120 Hb_003929_120 Hb_000364_210--Hb_003929_120 Hb_001862_100--Hb_003938_180 Hb_001829_060 Hb_001829_060 Hb_001862_100--Hb_001829_060 Hb_001141_280 Hb_001141_280 Hb_001862_100--Hb_001141_280 Hb_001109_020 Hb_001109_020 Hb_001862_100--Hb_001109_020 Hb_000046_110 Hb_000046_110 Hb_001862_100--Hb_000046_110 Hb_002028_130 Hb_002028_130 Hb_001862_100--Hb_002028_130 Hb_005914_200 Hb_005914_200 Hb_002719_080--Hb_005914_200 Hb_026048_070 Hb_026048_070 Hb_002719_080--Hb_026048_070 Hb_002518_290 Hb_002518_290 Hb_002719_080--Hb_002518_290 Hb_002719_080--Hb_000648_020 Hb_000236_150 Hb_000236_150 Hb_002719_080--Hb_000236_150 Hb_002025_300 Hb_002025_300 Hb_000648_020--Hb_002025_300 Hb_124755_010 Hb_124755_010 Hb_000648_020--Hb_124755_010 Hb_001427_230 Hb_001427_230 Hb_000648_020--Hb_001427_230 Hb_012490_050 Hb_012490_050 Hb_000648_020--Hb_012490_050 Hb_000224_090 Hb_000224_090 Hb_000648_020--Hb_000224_090 Hb_002471_080 Hb_002471_080 Hb_000648_020--Hb_002471_080 Hb_000069_100 Hb_000069_100 Hb_003938_180--Hb_000069_100 Hb_003938_180--Hb_002471_080 Hb_005731_170 Hb_005731_170 Hb_003938_180--Hb_005731_170 Hb_007382_150 Hb_007382_150 Hb_003938_180--Hb_007382_150 Hb_148200_010 Hb_148200_010 Hb_003938_180--Hb_148200_010 Hb_001258_080 Hb_001258_080 Hb_002539_090--Hb_001258_080 Hb_000751_130 Hb_000751_130 Hb_002539_090--Hb_000751_130 Hb_001173_040 Hb_001173_040 Hb_002539_090--Hb_001173_040 Hb_007594_090 Hb_007594_090 Hb_002539_090--Hb_007594_090 Hb_001357_080 Hb_001357_080 Hb_002539_090--Hb_001357_080 Hb_000172_030 Hb_000172_030 Hb_002539_090--Hb_000172_030 Hb_001575_020 Hb_001575_020 Hb_003929_120--Hb_001575_020 Hb_003929_120--Hb_000069_100 Hb_001616_060 Hb_001616_060 Hb_003929_120--Hb_001616_060 Hb_003929_120--Hb_007382_150 Hb_003929_120--Hb_003938_180 Hb_003929_120--Hb_000224_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
73.5214 15.5565 18.026 47.0332 82.9214 224.811
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
232.948 505.581 320.208 142.055 67.9663

CAGE analysis