Hb_000365_100

Information

Type -
Description -
Location Contig365: 81390-88252
Sequence    

Annotation

kegg
ID rcu:RCOM_1323560
description Glycosyltransferase QUASIMODO1, putative
nr
ID XP_012090954.1
description PREDICTED: probable galacturonosyltransferase 7 isoform X1 [Jatropha curcas]
swissprot
ID Q9ZVI7
description Probable galacturonosyltransferase 7 OS=Arabidopsis thaliana GN=GAUT7 PE=1 SV=2
trembl
ID A0A067JP82
description Hexosyltransferase OS=Jatropha curcas GN=JCGZ_00597 PE=3 SV=1
Gene Ontology
ID GO:0000139
description probable galacturonosyltransferase 7 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37549: 81213-82193 , PASA_asmbl_37551: 84298-84763 , PASA_asmbl_37552: 84890-86519 , PASA_asmbl_37553: 86891-88203
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000365_100 0.0 - - PREDICTED: probable galacturonosyltransferase 7 isoform X1 [Jatropha curcas]
2 Hb_000136_140 0.0899147161 - - PREDICTED: uncharacterized protein LOC105648960 [Jatropha curcas]
3 Hb_000347_040 0.096945353 - - hypothetical protein JCGZ_24660 [Jatropha curcas]
4 Hb_001604_120 0.098761546 - - PREDICTED: hemK methyltransferase family member 1 isoform X2 [Jatropha curcas]
5 Hb_000188_050 0.1048538044 - - PREDICTED: uridine nucleosidase 1 [Jatropha curcas]
6 Hb_013726_080 0.1059852103 - - Glycogen synthase kinase-3 beta, putative [Ricinus communis]
7 Hb_002498_140 0.111797541 - - PREDICTED: peroxisomal membrane protein PMP22-like isoform X1 [Solanum lycopersicum]
8 Hb_044662_060 0.1118564317 - - PREDICTED: long chain acyl-CoA synthetase 9, chloroplastic [Jatropha curcas]
9 Hb_002874_180 0.1155436703 - - PREDICTED: protein AIG2-like isoform X1 [Jatropha curcas]
10 Hb_000836_290 0.1185744491 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
11 Hb_000445_140 0.1192079153 - - hypothetical protein RCOM_0561550 [Ricinus communis]
12 Hb_000108_050 0.120489185 - - PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC [Jatropha curcas]
13 Hb_000700_150 0.1211543259 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000787_060 0.121265995 - - thioredoxin domain-containing protein, putative [Ricinus communis]
15 Hb_171334_010 0.1212667928 - - PREDICTED: CDPK-related kinase 5 [Jatropha curcas]
16 Hb_000071_150 0.1226845677 - - Stearoy-ACP desaturase [Ricinus communis]
17 Hb_004032_410 0.1234107021 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
18 Hb_001619_050 0.1236546812 - - PREDICTED: uncharacterized protein LOC105630599 isoform X1 [Jatropha curcas]
19 Hb_143766_020 0.1242889042 - - putative phospholipase A2 [Gossypium arboreum]
20 Hb_012098_150 0.1262511732 - - ARC5 protein [Manihot esculenta]

Gene co-expression network

sample Hb_000365_100 Hb_000365_100 Hb_000136_140 Hb_000136_140 Hb_000365_100--Hb_000136_140 Hb_000347_040 Hb_000347_040 Hb_000365_100--Hb_000347_040 Hb_001604_120 Hb_001604_120 Hb_000365_100--Hb_001604_120 Hb_000188_050 Hb_000188_050 Hb_000365_100--Hb_000188_050 Hb_013726_080 Hb_013726_080 Hb_000365_100--Hb_013726_080 Hb_002498_140 Hb_002498_140 Hb_000365_100--Hb_002498_140 Hb_001512_040 Hb_001512_040 Hb_000136_140--Hb_001512_040 Hb_000244_180 Hb_000244_180 Hb_000136_140--Hb_000244_180 Hb_012573_050 Hb_012573_050 Hb_000136_140--Hb_012573_050 Hb_000836_290 Hb_000836_290 Hb_000136_140--Hb_000836_290 Hb_006810_030 Hb_006810_030 Hb_000136_140--Hb_006810_030 Hb_004096_240 Hb_004096_240 Hb_000347_040--Hb_004096_240 Hb_000120_210 Hb_000120_210 Hb_000347_040--Hb_000120_210 Hb_005895_010 Hb_005895_010 Hb_000347_040--Hb_005895_010 Hb_069662_010 Hb_069662_010 Hb_000347_040--Hb_069662_010 Hb_001876_040 Hb_001876_040 Hb_000347_040--Hb_001876_040 Hb_000181_240 Hb_000181_240 Hb_001604_120--Hb_000181_240 Hb_001604_120--Hb_002498_140 Hb_000015_100 Hb_000015_100 Hb_001604_120--Hb_000015_100 Hb_000445_140 Hb_000445_140 Hb_001604_120--Hb_000445_140 Hb_000416_200 Hb_000416_200 Hb_001604_120--Hb_000416_200 Hb_139002_010 Hb_139002_010 Hb_000188_050--Hb_139002_010 Hb_000787_060 Hb_000787_060 Hb_000188_050--Hb_000787_060 Hb_000903_010 Hb_000903_010 Hb_000188_050--Hb_000903_010 Hb_000188_050--Hb_000347_040 Hb_002473_050 Hb_002473_050 Hb_000188_050--Hb_002473_050 Hb_002539_110 Hb_002539_110 Hb_013726_080--Hb_002539_110 Hb_001486_170 Hb_001486_170 Hb_013726_080--Hb_001486_170 Hb_000915_080 Hb_000915_080 Hb_013726_080--Hb_000915_080 Hb_005463_130 Hb_005463_130 Hb_013726_080--Hb_005463_130 Hb_002054_050 Hb_002054_050 Hb_013726_080--Hb_002054_050 Hb_003430_090 Hb_003430_090 Hb_013726_080--Hb_003430_090 Hb_000136_110 Hb_000136_110 Hb_002498_140--Hb_000136_110 Hb_010931_070 Hb_010931_070 Hb_002498_140--Hb_010931_070 Hb_000088_190 Hb_000088_190 Hb_002498_140--Hb_000088_190 Hb_000046_040 Hb_000046_040 Hb_002498_140--Hb_000046_040 Hb_044662_060 Hb_044662_060 Hb_002498_140--Hb_044662_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.03544 2.84379 14.7205 11.0396 11.3669 9.66791
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.19982 4.97162 5.57712 3.29903 12.9594

CAGE analysis