Hb_000365_200

Information

Type -
Description -
Location Contig365: 188121-193392
Sequence    

Annotation

kegg
ID rcu:RCOM_1323170
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
nr
ID XP_012090969.1
description PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
swissprot
ID P35493
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis PE=1 SV=2
trembl
ID A0A067JP90
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00607 PE=4 SV=1
Gene Ontology
ID GO:0005737
description #NAME?

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37573: 188069-193380
cDNA
(Sanger)
(ID:Location)		 003_D12.ab1: 188069-191167

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000365_200 0.0 - - PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
2 Hb_003683_130 0.0865931344 - - PREDICTED: enolase 1, chloroplastic [Jatropha curcas]
3 Hb_004297_090 0.0906940245 - - PREDICTED: DNA polymerase epsilon catalytic subunit A [Jatropha curcas]
4 Hb_000260_400 0.0999619649 - - PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
5 Hb_022092_010 0.100245041 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Jatropha curcas]
6 Hb_001677_100 0.1145047241 - - delta1-pyrroline-5-carboxylate synthase [Manihot esculenta]
7 Hb_006816_230 0.119459818 - - protein disulfide isomerase, putative [Ricinus communis]
8 Hb_001616_070 0.1198129042 - - PREDICTED: uncharacterized protein LOC105644365 [Jatropha curcas]
9 Hb_002284_100 0.1236157157 - - ribophorin, putative [Ricinus communis]
10 Hb_007317_020 0.1243714686 - - PREDICTED: transmembrane 9 superfamily member 5 isoform X1 [Jatropha curcas]
11 Hb_009296_020 0.127325093 desease resistance Gene Name: ATP-synt_ab_N PREDICTED: ATP synthase subunit beta, mitochondrial-like [Jatropha curcas]
12 Hb_002631_130 0.1289489042 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
13 Hb_031527_080 0.1293481388 - - utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis]
14 Hb_000473_030 0.1300638715 - - hypothetical protein JCGZ_19297 [Jatropha curcas]
15 Hb_005846_050 0.130636201 - - PREDICTED: calmodulin-binding transcription activator 3 [Jatropha curcas]
16 Hb_000258_090 0.1329981613 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
17 Hb_005854_040 0.1338303982 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001504_060 0.1365437312 - - PREDICTED: nuclear pore complex protein NUP93A-like [Jatropha curcas]
19 Hb_000009_060 0.137786978 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
20 Hb_003025_030 0.137793286 - - PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000365_200 Hb_000365_200 Hb_003683_130 Hb_003683_130 Hb_000365_200--Hb_003683_130 Hb_004297_090 Hb_004297_090 Hb_000365_200--Hb_004297_090 Hb_000260_400 Hb_000260_400 Hb_000365_200--Hb_000260_400 Hb_022092_010 Hb_022092_010 Hb_000365_200--Hb_022092_010 Hb_001677_100 Hb_001677_100 Hb_000365_200--Hb_001677_100 Hb_006816_230 Hb_006816_230 Hb_000365_200--Hb_006816_230 Hb_003683_130--Hb_000260_400 Hb_001616_070 Hb_001616_070 Hb_003683_130--Hb_001616_070 Hb_003683_130--Hb_004297_090 Hb_003683_130--Hb_022092_010 Hb_000009_060 Hb_000009_060 Hb_003683_130--Hb_000009_060 Hb_004297_090--Hb_001677_100 Hb_004297_090--Hb_000260_400 Hb_004883_020 Hb_004883_020 Hb_004297_090--Hb_004883_020 Hb_009296_020 Hb_009296_020 Hb_004297_090--Hb_009296_020 Hb_005741_040 Hb_005741_040 Hb_000260_400--Hb_005741_040 Hb_002687_180 Hb_002687_180 Hb_000260_400--Hb_002687_180 Hb_002317_010 Hb_002317_010 Hb_000260_400--Hb_002317_010 Hb_000260_400--Hb_001616_070 Hb_002687_200 Hb_002687_200 Hb_000260_400--Hb_002687_200 Hb_001689_040 Hb_001689_040 Hb_022092_010--Hb_001689_040 Hb_002392_020 Hb_002392_020 Hb_022092_010--Hb_002392_020 Hb_013358_050 Hb_013358_050 Hb_022092_010--Hb_013358_050 Hb_132101_010 Hb_132101_010 Hb_022092_010--Hb_132101_010 Hb_002284_100 Hb_002284_100 Hb_022092_010--Hb_002284_100 Hb_001434_020 Hb_001434_020 Hb_001677_100--Hb_001434_020 Hb_001677_100--Hb_009296_020 Hb_001677_100--Hb_000260_400 Hb_011214_110 Hb_011214_110 Hb_001677_100--Hb_011214_110 Hb_002849_050 Hb_002849_050 Hb_001677_100--Hb_002849_050 Hb_000649_060 Hb_000649_060 Hb_006816_230--Hb_000649_060 Hb_006816_230--Hb_022092_010 Hb_001587_030 Hb_001587_030 Hb_006816_230--Hb_001587_030 Hb_005846_050 Hb_005846_050 Hb_006816_230--Hb_005846_050 Hb_004096_110 Hb_004096_110 Hb_006816_230--Hb_004096_110 Hb_006816_230--Hb_002284_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.23031 21.7454 62.8693 63.9664 19.9633 9.57196
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.10103 9.19127 25.7369 80.5816 47.2508

CAGE analysis