Hb_000366_050

Information

Type -
Description -
Location Contig366: 33983-38115
Sequence    

Annotation

kegg
ID cic:CICLE_v10008397mg
description hypothetical protein
nr
ID XP_012078775.1
description PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
swissprot
ID Q9EPI1
description Xylosyltransferase 1 (Fragment) OS=Rattus norvegicus GN=Xylt1 PE=2 SV=1
trembl
ID A0A067KKQ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13319 PE=4 SV=1
Gene Ontology
ID GO:0016020
description xylosyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37674: 34057-38045 , PASA_asmbl_37675: 36093-36408
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000366_050 0.0 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
2 Hb_011381_070 0.0767692451 transcription factor TF Family: DBB PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Jatropha curcas]
3 Hb_001158_120 0.080674697 - - PREDICTED: uncharacterized protein LOC105648761 isoform X1 [Jatropha curcas]
4 Hb_002609_290 0.0930373113 - - PREDICTED: non-specific phospholipase C1 [Jatropha curcas]
5 Hb_005539_100 0.1029585662 - - nucleoside transporter, putative [Ricinus communis]
6 Hb_000329_790 0.111877621 - - PREDICTED: uncharacterized protein LOC105643367 [Jatropha curcas]
7 Hb_001294_040 0.1140284946 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
8 Hb_132840_020 0.1173335123 - - PREDICTED: protein LHY [Jatropha curcas]
9 Hb_071072_010 0.1240981182 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
10 Hb_000007_440 0.1292027683 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
11 Hb_002849_180 0.132585976 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
12 Hb_007483_080 0.1345175851 - - hypothetical protein RCOM_0634810 [Ricinus communis]
13 Hb_000111_390 0.1362397238 - - PREDICTED: uncharacterized protein LOC105631262 isoform X1 [Jatropha curcas]
14 Hb_002375_060 0.1366855674 - - PREDICTED: uncharacterized protein LOC105628271 [Jatropha curcas]
15 Hb_002073_020 0.1369887959 - - PREDICTED: uncharacterized protein LOC105631164 [Jatropha curcas]
16 Hb_000035_490 0.1372164646 transcription factor TF Family: DBB PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Jatropha curcas]
17 Hb_001102_090 0.1376589568 - - PREDICTED: mitogen-activated protein kinase 19 [Jatropha curcas]
18 Hb_001141_060 0.1380820997 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Jatropha curcas]
19 Hb_001627_010 0.1385993833 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
20 Hb_172676_010 0.1422157798 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]

Gene co-expression network

sample Hb_000366_050 Hb_000366_050 Hb_011381_070 Hb_011381_070 Hb_000366_050--Hb_011381_070 Hb_001158_120 Hb_001158_120 Hb_000366_050--Hb_001158_120 Hb_002609_290 Hb_002609_290 Hb_000366_050--Hb_002609_290 Hb_005539_100 Hb_005539_100 Hb_000366_050--Hb_005539_100 Hb_000329_790 Hb_000329_790 Hb_000366_050--Hb_000329_790 Hb_001294_040 Hb_001294_040 Hb_000366_050--Hb_001294_040 Hb_011381_070--Hb_001158_120 Hb_000035_490 Hb_000035_490 Hb_011381_070--Hb_000035_490 Hb_011381_070--Hb_002609_290 Hb_011381_070--Hb_001294_040 Hb_132840_020 Hb_132840_020 Hb_011381_070--Hb_132840_020 Hb_001158_120--Hb_001294_040 Hb_001158_120--Hb_002609_290 Hb_001158_120--Hb_005539_100 Hb_007483_080 Hb_007483_080 Hb_001158_120--Hb_007483_080 Hb_010812_060 Hb_010812_060 Hb_002609_290--Hb_010812_060 Hb_002997_110 Hb_002997_110 Hb_002609_290--Hb_002997_110 Hb_001627_010 Hb_001627_010 Hb_002609_290--Hb_001627_010 Hb_172676_010 Hb_172676_010 Hb_005539_100--Hb_172676_010 Hb_005539_100--Hb_011381_070 Hb_002073_020 Hb_002073_020 Hb_005539_100--Hb_002073_020 Hb_000369_070 Hb_000369_070 Hb_005539_100--Hb_000369_070 Hb_005064_070 Hb_005064_070 Hb_000329_790--Hb_005064_070 Hb_048476_040 Hb_048476_040 Hb_000329_790--Hb_048476_040 Hb_000329_790--Hb_132840_020 Hb_009449_100 Hb_009449_100 Hb_000329_790--Hb_009449_100 Hb_001179_010 Hb_001179_010 Hb_000329_790--Hb_001179_010 Hb_014361_170 Hb_014361_170 Hb_001294_040--Hb_014361_170 Hb_000008_430 Hb_000008_430 Hb_001294_040--Hb_000008_430 Hb_001294_040--Hb_000035_490
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.46246 21.9392 24.7969 14.2172 1.73072 2.74565
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.547858 0.56821 0.148249 6.88923 11.7277

CAGE analysis