Hb_000366_120

Information

Type -
Description -
Location Contig366: 110854-111945
Sequence    

Annotation

kegg
ID rcu:RCOM_0222530
description Protein HLJ1, putative
nr
ID XP_012078767.1
description PREDICTED: chaperone protein dnaJ 49-like [Jatropha curcas]
swissprot
ID Q9FH28
description Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2 SV=2
trembl
ID A0A067KKP8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13314 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37683: 109697-112247 , PASA_asmbl_37684: 110689-112247
cDNA
(Sanger)
(ID:Location)		 017_H09.ab1: 111375-112247

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000366_120 0.0 - - PREDICTED: chaperone protein dnaJ 49-like [Jatropha curcas]
2 Hb_007576_110 0.0461859762 - - Endoplasmic reticulum vesicle transporter protein [Theobroma cacao]
3 Hb_021409_040 0.0536797768 - - PREDICTED: FAS-associated factor 2 [Jatropha curcas]
4 Hb_004195_200 0.0593608549 - - glycosyl transferase family 1 family protein [Populus trichocarpa]
5 Hb_014497_050 0.0596787645 transcription factor TF Family: bZIP hypothetical protein JCGZ_08021 [Jatropha curcas]
6 Hb_001409_020 0.0618822814 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105638648 [Jatropha curcas]
7 Hb_000789_310 0.0652610761 - - PREDICTED: E3 ubiquitin-protein ligase PRT1 [Jatropha curcas]
8 Hb_000780_230 0.0671486345 transcription factor TF Family: WRKY WRKY protein [Hevea brasiliensis]
9 Hb_000080_150 0.0679779117 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X2 [Jatropha curcas]
10 Hb_000617_100 0.0683431264 - - PREDICTED: uncharacterized protein LOC105647493 [Jatropha curcas]
11 Hb_014361_070 0.0688537671 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
12 Hb_000479_220 0.0700389903 - - PREDICTED: uncharacterized protein LOC105644125 [Jatropha curcas]
13 Hb_000070_080 0.0702514543 - - PREDICTED: uncharacterized protein LOC105645742 isoform X2 [Jatropha curcas]
14 Hb_013399_100 0.0719141396 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000574_540 0.0722303035 - - ATP binding protein, putative [Ricinus communis]
16 Hb_123352_020 0.0736283259 - - PREDICTED: pentatricopeptide repeat-containing protein At5g65560 [Jatropha curcas]
17 Hb_008511_090 0.0737809897 - - PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Jatropha curcas]
18 Hb_000190_120 0.0747150653 - - PREDICTED: uncharacterized protein LOC105649936 [Jatropha curcas]
19 Hb_003680_150 0.0748732066 - - srpk, putative [Ricinus communis]
20 Hb_000060_090 0.0751545899 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-4a [Jatropha curcas]

Gene co-expression network

sample Hb_000366_120 Hb_000366_120 Hb_007576_110 Hb_007576_110 Hb_000366_120--Hb_007576_110 Hb_021409_040 Hb_021409_040 Hb_000366_120--Hb_021409_040 Hb_004195_200 Hb_004195_200 Hb_000366_120--Hb_004195_200 Hb_014497_050 Hb_014497_050 Hb_000366_120--Hb_014497_050 Hb_001409_020 Hb_001409_020 Hb_000366_120--Hb_001409_020 Hb_000789_310 Hb_000789_310 Hb_000366_120--Hb_000789_310 Hb_007576_110--Hb_000789_310 Hb_014361_070 Hb_014361_070 Hb_007576_110--Hb_014361_070 Hb_000190_120 Hb_000190_120 Hb_007576_110--Hb_000190_120 Hb_007576_110--Hb_001409_020 Hb_002375_010 Hb_002375_010 Hb_007576_110--Hb_002375_010 Hb_021409_040--Hb_014497_050 Hb_021409_040--Hb_001409_020 Hb_006634_070 Hb_006634_070 Hb_021409_040--Hb_006634_070 Hb_000958_140 Hb_000958_140 Hb_021409_040--Hb_000958_140 Hb_022115_020 Hb_022115_020 Hb_021409_040--Hb_022115_020 Hb_004195_200--Hb_002375_010 Hb_001104_160 Hb_001104_160 Hb_004195_200--Hb_001104_160 Hb_004195_200--Hb_007576_110 Hb_020831_030 Hb_020831_030 Hb_004195_200--Hb_020831_030 Hb_003640_040 Hb_003640_040 Hb_004195_200--Hb_003640_040 Hb_011671_430 Hb_011671_430 Hb_014497_050--Hb_011671_430 Hb_000915_020 Hb_000915_020 Hb_014497_050--Hb_000915_020 Hb_028285_010 Hb_028285_010 Hb_014497_050--Hb_028285_010 Hb_000030_190 Hb_000030_190 Hb_014497_050--Hb_000030_190 Hb_010618_010 Hb_010618_010 Hb_001409_020--Hb_010618_010 Hb_001248_060 Hb_001248_060 Hb_001409_020--Hb_001248_060 Hb_013399_100 Hb_013399_100 Hb_001409_020--Hb_013399_100 Hb_167498_010 Hb_167498_010 Hb_001409_020--Hb_167498_010 Hb_008406_200 Hb_008406_200 Hb_001409_020--Hb_008406_200 Hb_000789_310--Hb_000030_190 Hb_033642_030 Hb_033642_030 Hb_000789_310--Hb_033642_030 Hb_000462_060 Hb_000462_060 Hb_000789_310--Hb_000462_060 Hb_000345_380 Hb_000345_380 Hb_000789_310--Hb_000345_380 Hb_000789_310--Hb_001409_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
49.99 57.0845 29.3914 46.9585 59.0396 52.6553
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
46.6486 36.37 43.3512 40.9055 28.4819

CAGE analysis