Hb_000367_060

Information

Type -
Description -
Location Contig367: 78822-85723
Sequence    

Annotation

kegg
ID rcu:RCOM_1470420
description diacylglycerol kinase, theta, putative (EC:2.7.1.107)
nr
ID XP_002514684.1
description diacylglycerol kinase, theta, putative [Ricinus communis]
swissprot
ID Q39017
description Diacylglycerol kinase 1 OS=Arabidopsis thaliana GN=DGK1 PE=1 SV=2
trembl
ID B9RLR5
description Diacylglycerol kinase OS=Ricinus communis GN=RCOM_1470420 PE=3 SV=1
Gene Ontology
ID GO:0004143
description diacylglycerol kinase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37731: 78903-85716 , PASA_asmbl_37732: 84515-84863
cDNA
(Sanger)
(ID:Location)		 018_B19.ab1: 78908-79700 , 030_D23.ab1: 78903-80012 , 047_P04.ab1: 78903-79932

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000367_060 0.0 - - diacylglycerol kinase, theta, putative [Ricinus communis]
2 Hb_000696_040 0.0853902906 - - protein phosphatase 2c, putative [Ricinus communis]
3 Hb_001699_130 0.085755374 transcription factor TF Family: CSD PREDICTED: cold shock domain-containing protein 3 [Jatropha curcas]
4 Hb_002435_120 0.0873980172 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
5 Hb_000340_390 0.0918460313 - - PREDICTED: autophagy-related protein 18g [Jatropha curcas]
6 Hb_021596_040 0.0946277709 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
7 Hb_001959_190 0.0958240406 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
8 Hb_010608_050 0.0983365306 - - PREDICTED: uncharacterized protein LOC105645728 [Jatropha curcas]
9 Hb_004607_030 0.1002571451 - - PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Jatropha curcas]
10 Hb_001454_190 0.1040980712 - - PREDICTED: pentatricopeptide repeat-containing protein At3g06920 [Jatropha curcas]
11 Hb_002585_020 0.1041818896 - - PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like [Populus euphratica]
12 Hb_000617_150 0.1080484352 - - PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like [Jatropha curcas]
13 Hb_016901_010 0.1121039425 - - PREDICTED: WPP domain-interacting protein 1-like [Jatropha curcas]
14 Hb_003687_240 0.1127341566 - - PREDICTED: cryptochrome-1 [Jatropha curcas]
15 Hb_172932_010 0.113583491 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_000086_400 0.1143009932 - - calmodulin binding protein, putative [Ricinus communis]
17 Hb_002631_060 0.1171054246 - - PREDICTED: uncharacterized protein LOC105646151 [Jatropha curcas]
18 Hb_085863_030 0.1186461148 - - PREDICTED: pentatricopeptide repeat-containing protein At1g31430 [Jatropha curcas]
19 Hb_086639_030 0.1190057255 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
20 Hb_000062_220 0.1193592823 - - BnaC02g35870D [Brassica napus]

Gene co-expression network

sample Hb_000367_060 Hb_000367_060 Hb_000696_040 Hb_000696_040 Hb_000367_060--Hb_000696_040 Hb_001699_130 Hb_001699_130 Hb_000367_060--Hb_001699_130 Hb_002435_120 Hb_002435_120 Hb_000367_060--Hb_002435_120 Hb_000340_390 Hb_000340_390 Hb_000367_060--Hb_000340_390 Hb_021596_040 Hb_021596_040 Hb_000367_060--Hb_021596_040 Hb_001959_190 Hb_001959_190 Hb_000367_060--Hb_001959_190 Hb_000696_040--Hb_001699_130 Hb_004607_030 Hb_004607_030 Hb_000696_040--Hb_004607_030 Hb_016901_010 Hb_016901_010 Hb_000696_040--Hb_016901_010 Hb_000617_150 Hb_000617_150 Hb_000696_040--Hb_000617_150 Hb_000062_220 Hb_000062_220 Hb_000696_040--Hb_000062_220 Hb_002631_060 Hb_002631_060 Hb_000696_040--Hb_002631_060 Hb_001699_130--Hb_000617_150 Hb_000120_680 Hb_000120_680 Hb_001699_130--Hb_000120_680 Hb_000723_080 Hb_000723_080 Hb_001699_130--Hb_000723_080 Hb_010608_050 Hb_010608_050 Hb_001699_130--Hb_010608_050 Hb_001699_130--Hb_016901_010 Hb_000185_040 Hb_000185_040 Hb_002435_120--Hb_000185_040 Hb_000107_330 Hb_000107_330 Hb_002435_120--Hb_000107_330 Hb_001377_490 Hb_001377_490 Hb_002435_120--Hb_001377_490 Hb_000086_400 Hb_000086_400 Hb_002435_120--Hb_000086_400 Hb_001085_060 Hb_001085_060 Hb_002435_120--Hb_001085_060 Hb_000120_460 Hb_000120_460 Hb_002435_120--Hb_000120_460 Hb_001454_190 Hb_001454_190 Hb_000340_390--Hb_001454_190 Hb_003687_240 Hb_003687_240 Hb_000340_390--Hb_003687_240 Hb_000340_390--Hb_001959_190 Hb_004607_050 Hb_004607_050 Hb_000340_390--Hb_004607_050 Hb_001811_030 Hb_001811_030 Hb_000340_390--Hb_001811_030 Hb_021596_040--Hb_001699_130 Hb_011214_020 Hb_011214_020 Hb_021596_040--Hb_011214_020 Hb_021596_040--Hb_003687_240 Hb_012114_040 Hb_012114_040 Hb_021596_040--Hb_012114_040 Hb_007441_230 Hb_007441_230 Hb_021596_040--Hb_007441_230 Hb_020805_130 Hb_020805_130 Hb_001959_190--Hb_020805_130 Hb_001959_190--Hb_004607_030 Hb_001014_030 Hb_001014_030 Hb_001959_190--Hb_001014_030 Hb_003371_090 Hb_003371_090 Hb_001959_190--Hb_003371_090 Hb_009803_050 Hb_009803_050 Hb_001959_190--Hb_009803_050 Hb_001507_040 Hb_001507_040 Hb_001959_190--Hb_001507_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.74477 13.3192 4.29801 12.9205 16.4696 16.7174
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.9024 27.0205 36.1968 17.4558 9.26671

CAGE analysis