Hb_000367_280

Information

Type -
Description -
Location Contig367: 231362-234687
Sequence    

Annotation

kegg
ID rcu:RCOM_1470740
description dimethylaniline monooxygenase, putative (EC:1.14.13.8)
nr
ID XP_012080330.1
description PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 9 [Jatropha curcas]
swissprot
ID Q9FF12
description Flavin-containing monooxygenase FMO GS-OX-like 9 OS=Arabidopsis thaliana GN=At5g07800 PE=2 SV=1
trembl
ID A0A067KHJ9
description Flavin-containing monooxygenase OS=Jatropha curcas GN=JCGZ_11680 PE=3 SV=1
Gene Ontology
ID GO:0004499
description flavin-containing monooxygenase fmo gs-ox-like 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37757: 231320-231763 , PASA_asmbl_37758: 232288-232720
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000367_280 0.0 - - PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 9 [Jatropha curcas]
2 Hb_001268_080 0.0570501255 - - catalytic, putative [Ricinus communis]
3 Hb_001213_120 0.0664009723 - - PREDICTED: immediate early response 3-interacting protein 1-like [Brassica rapa]
4 Hb_011245_020 0.0755869827 - - Ferrochelatase [Medicago truncatula]
5 Hb_007810_030 0.0779016447 - - PREDICTED: uncharacterized protein LOC105647693 [Jatropha curcas]
6 Hb_004297_040 0.0913734574 - - acyl CoA reductase [Hevea brasiliensis]
7 Hb_078633_010 0.0978335559 - - PREDICTED: RNA-binding protein 24-B isoform X1 [Jatropha curcas]
8 Hb_000078_010 0.1029449354 - - hypothetical protein POPTR_0006s06510g, partial [Populus trichocarpa]
9 Hb_015934_020 0.1042908076 - - PREDICTED: uncharacterized protein LOC105638669 [Jatropha curcas]
10 Hb_006831_030 0.105141898 - - PREDICTED: ras-related protein RABB1c [Fragaria vesca subsp. vesca]
11 Hb_001102_250 0.1090431041 - - PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Jatropha curcas]
12 Hb_003043_120 0.1134213038 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001935_030 0.1161853046 - - conserved hypothetical protein [Ricinus communis]
14 Hb_008066_040 0.1246486018 transcription factor TF Family: M-type PREDICTED: agamous-like MADS-box protein AGL62 [Jatropha curcas]
15 Hb_012395_210 0.1284411812 - - conserved hypothetical protein [Ricinus communis]
16 Hb_072912_020 0.1286825207 - - abhydrolase domain containing, putative [Ricinus communis]
17 Hb_002685_090 0.1322416374 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0004s04590g [Populus trichocarpa]
18 Hb_005841_040 0.1328991215 - - stress-induced hydrophobic peptide 1 [Hevea brasiliensis]
19 Hb_001396_190 0.1331768237 - - PREDICTED: uncharacterized protein LOC105123025 [Populus euphratica]
20 Hb_000032_040 0.1333288881 - - PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 [Jatropha curcas]

Gene co-expression network

sample Hb_000367_280 Hb_000367_280 Hb_001268_080 Hb_001268_080 Hb_000367_280--Hb_001268_080 Hb_001213_120 Hb_001213_120 Hb_000367_280--Hb_001213_120 Hb_011245_020 Hb_011245_020 Hb_000367_280--Hb_011245_020 Hb_007810_030 Hb_007810_030 Hb_000367_280--Hb_007810_030 Hb_004297_040 Hb_004297_040 Hb_000367_280--Hb_004297_040 Hb_078633_010 Hb_078633_010 Hb_000367_280--Hb_078633_010 Hb_001268_080--Hb_001213_120 Hb_001268_080--Hb_078633_010 Hb_001268_080--Hb_011245_020 Hb_006831_030 Hb_006831_030 Hb_001268_080--Hb_006831_030 Hb_001268_080--Hb_004297_040 Hb_001213_120--Hb_078633_010 Hb_001213_120--Hb_004297_040 Hb_015934_020 Hb_015934_020 Hb_001213_120--Hb_015934_020 Hb_001213_120--Hb_007810_030 Hb_003043_120 Hb_003043_120 Hb_011245_020--Hb_003043_120 Hb_011245_020--Hb_006831_030 Hb_011245_020--Hb_007810_030 Hb_017862_010 Hb_017862_010 Hb_011245_020--Hb_017862_010 Hb_007810_030--Hb_015934_020 Hb_000078_010 Hb_000078_010 Hb_007810_030--Hb_000078_010 Hb_000032_220 Hb_000032_220 Hb_007810_030--Hb_000032_220 Hb_004297_040--Hb_078633_010 Hb_005137_020 Hb_005137_020 Hb_004297_040--Hb_005137_020 Hb_001102_250 Hb_001102_250 Hb_004297_040--Hb_001102_250 Hb_072912_020 Hb_072912_020 Hb_078633_010--Hb_072912_020 Hb_078633_010--Hb_005137_020 Hb_000544_110 Hb_000544_110 Hb_078633_010--Hb_000544_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
34.5133 1.13749 1.69617 6.95646 18.3262 30.5835
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
92.497 117.352 109.68 10.0728 4.08011

CAGE analysis