Hb_000367_310

Information

Type -
Description -
Location Contig367: 300929-304838
Sequence    

Annotation

kegg
ID rcu:RCOM_1470870
description Brassinosteroid LRR receptor kinase precursor, putative (EC:2.7.12.2 3.1.3.16)
nr
ID XP_002514709.1
description Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
swissprot
ID C0LGJ1
description Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=2 SV=1
trembl
ID B9RLU0
description Brassinosteroid LRR receptor kinase, putative OS=Ricinus communis GN=RCOM_1470870 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable lrr receptor-like serine threonine-protein kinase at1g74360

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000367_310 0.0 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
2 Hb_001408_050 0.1332358601 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000928_040 0.1485827025 - - cytochrome P450, putative [Ricinus communis]
4 Hb_055305_010 0.1507333425 - - Disease resistance protein RFL1, putative [Ricinus communis]
5 Hb_007919_040 0.1510464402 - - PREDICTED: protein LYK5 [Jatropha curcas]
6 Hb_003576_050 0.1533609188 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
7 Hb_003453_030 0.1587241967 - - hypothetical protein JCGZ_26893 [Jatropha curcas]
8 Hb_004044_030 0.1606809167 - - PREDICTED: uncharacterized protein LOC105639335 [Jatropha curcas]
9 Hb_117168_010 0.1689564976 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
10 Hb_002551_090 0.1698477199 - - hypothetical protein JCGZ_17224 [Jatropha curcas]
11 Hb_009823_010 0.1729845194 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
12 Hb_004195_170 0.1731301631 - - ATP binding protein, putative [Ricinus communis]
13 Hb_022501_020 0.1895798165 - - AMP dependent CoA ligase, putative [Ricinus communis]
14 Hb_001678_030 0.1896933078 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Jatropha curcas]
15 Hb_002928_180 0.1906239339 - - catalase CAT1 [Manihot esculenta]
16 Hb_000963_200 0.190700549 - - beta-galactosidase, putative [Ricinus communis]
17 Hb_029584_090 0.1911283095 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
18 Hb_000098_310 0.1913374472 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
19 Hb_004657_040 0.1920644122 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
20 Hb_006594_060 0.1941131878 transcription factor TF Family: HSF PREDICTED: heat shock factor protein HSF24 [Jatropha curcas]

Gene co-expression network

sample Hb_000367_310 Hb_000367_310 Hb_001408_050 Hb_001408_050 Hb_000367_310--Hb_001408_050 Hb_000928_040 Hb_000928_040 Hb_000367_310--Hb_000928_040 Hb_055305_010 Hb_055305_010 Hb_000367_310--Hb_055305_010 Hb_007919_040 Hb_007919_040 Hb_000367_310--Hb_007919_040 Hb_003576_050 Hb_003576_050 Hb_000367_310--Hb_003576_050 Hb_003453_030 Hb_003453_030 Hb_000367_310--Hb_003453_030 Hb_001408_050--Hb_003453_030 Hb_009823_010 Hb_009823_010 Hb_001408_050--Hb_009823_010 Hb_000181_160 Hb_000181_160 Hb_001408_050--Hb_000181_160 Hb_001678_030 Hb_001678_030 Hb_001408_050--Hb_001678_030 Hb_001408_050--Hb_003576_050 Hb_000638_090 Hb_000638_090 Hb_001408_050--Hb_000638_090 Hb_000645_210 Hb_000645_210 Hb_000928_040--Hb_000645_210 Hb_000928_040--Hb_003576_050 Hb_003517_020 Hb_003517_020 Hb_000928_040--Hb_003517_020 Hb_000928_040--Hb_007919_040 Hb_000093_150 Hb_000093_150 Hb_000928_040--Hb_000093_150 Hb_002551_090 Hb_002551_090 Hb_055305_010--Hb_002551_090 Hb_142332_010 Hb_142332_010 Hb_055305_010--Hb_142332_010 Hb_001838_050 Hb_001838_050 Hb_055305_010--Hb_001838_050 Hb_002750_010 Hb_002750_010 Hb_055305_010--Hb_002750_010 Hb_000616_050 Hb_000616_050 Hb_055305_010--Hb_000616_050 Hb_001454_410 Hb_001454_410 Hb_055305_010--Hb_001454_410 Hb_007919_040--Hb_003576_050 Hb_000853_060 Hb_000853_060 Hb_007919_040--Hb_000853_060 Hb_007919_040--Hb_003517_020 Hb_002291_020 Hb_002291_020 Hb_007919_040--Hb_002291_020 Hb_003576_050--Hb_009823_010 Hb_003576_050--Hb_003517_020 Hb_000313_370 Hb_000313_370 Hb_003576_050--Hb_000313_370 Hb_001248_030 Hb_001248_030 Hb_003576_050--Hb_001248_030 Hb_004195_170 Hb_004195_170 Hb_003453_030--Hb_004195_170 Hb_012807_060 Hb_012807_060 Hb_003453_030--Hb_012807_060 Hb_022501_020 Hb_022501_020 Hb_003453_030--Hb_022501_020 Hb_003453_030--Hb_001454_410 Hb_009581_050 Hb_009581_050 Hb_003453_030--Hb_009581_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.228496 3.14781 0.286469 1.78731 0.0252285 0.0788066
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.199403 0.156921 0.619885 5.01047 0.513753

CAGE analysis