Hb_000368_080

Information

Type -
Description -
Location Contig368: 128403-129060
Sequence    

Annotation

kegg
ID fve:101304253
description uncharacterized protein LOC101304253
nr
ID KJB13962.1
description hypothetical protein B456_002G103400 [Gossypium raimondii]
swissprot
ID -
description -
trembl
ID A0A0D2M937
description Gossypium raimondii chromosome 2, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_002G103400 PE=4 SV=1
Gene Ontology
ID GO:0005488
description kinesin-4 -like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000368_080 0.0 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
2 Hb_004195_250 0.2421598101 - - hypothetical protein PRUPE_ppa015658mg [Prunus persica]
3 Hb_165666_010 0.2421665511 - - -
4 Hb_006586_010 0.2689787115 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
5 Hb_003688_080 0.2838525918 - - -
6 Hb_148850_010 0.2899381305 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
7 Hb_001966_010 0.3060320928 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
8 Hb_001304_100 0.3371306398 - - -
9 Hb_000866_150 0.3479811654 - - -
10 Hb_003209_060 0.3498271122 - - -
11 Hb_004631_220 0.3506127127 - - -
12 Hb_113906_010 0.3563861705 - - hypothetical protein JCGZ_18857 [Jatropha curcas]
13 Hb_002382_030 0.3577937647 - - PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2-like isoform X2 [Malus domestica]
14 Hb_000892_070 0.358288318 - - PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Jatropha curcas]
15 Hb_128558_010 0.3592900576 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
16 Hb_001141_480 0.3597058436 - - -
17 Hb_148122_010 0.3602616486 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
18 Hb_003992_080 0.3617802474 - - PREDICTED: protein LURP-one-related 5 [Jatropha curcas]
19 Hb_011360_010 0.3656005233 - - PREDICTED: uncharacterized protein LOC104216696 [Nicotiana sylvestris]
20 Hb_096225_020 0.3725882352 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT22-like [Jatropha curcas]

Gene co-expression network

sample Hb_000368_080 Hb_000368_080 Hb_004195_250 Hb_004195_250 Hb_000368_080--Hb_004195_250 Hb_165666_010 Hb_165666_010 Hb_000368_080--Hb_165666_010 Hb_006586_010 Hb_006586_010 Hb_000368_080--Hb_006586_010 Hb_003688_080 Hb_003688_080 Hb_000368_080--Hb_003688_080 Hb_148850_010 Hb_148850_010 Hb_000368_080--Hb_148850_010 Hb_001966_010 Hb_001966_010 Hb_000368_080--Hb_001966_010 Hb_004195_250--Hb_165666_010 Hb_148122_010 Hb_148122_010 Hb_004195_250--Hb_148122_010 Hb_004195_250--Hb_006586_010 Hb_000483_420 Hb_000483_420 Hb_004195_250--Hb_000483_420 Hb_004460_010 Hb_004460_010 Hb_004195_250--Hb_004460_010 Hb_000866_150 Hb_000866_150 Hb_165666_010--Hb_000866_150 Hb_001304_100 Hb_001304_100 Hb_165666_010--Hb_001304_100 Hb_165666_010--Hb_003688_080 Hb_001141_480 Hb_001141_480 Hb_165666_010--Hb_001141_480 Hb_006586_010--Hb_001966_010 Hb_007757_140 Hb_007757_140 Hb_006586_010--Hb_007757_140 Hb_001190_090 Hb_001190_090 Hb_006586_010--Hb_001190_090 Hb_002118_040 Hb_002118_040 Hb_006586_010--Hb_002118_040 Hb_003688_080--Hb_001141_480 Hb_000352_180 Hb_000352_180 Hb_003688_080--Hb_000352_180 Hb_000832_230 Hb_000832_230 Hb_003688_080--Hb_000832_230 Hb_000249_120 Hb_000249_120 Hb_003688_080--Hb_000249_120 Hb_058143_010 Hb_058143_010 Hb_148850_010--Hb_058143_010 Hb_000094_110 Hb_000094_110 Hb_148850_010--Hb_000094_110 Hb_000340_440 Hb_000340_440 Hb_148850_010--Hb_000340_440 Hb_004942_020 Hb_004942_020 Hb_148850_010--Hb_004942_020 Hb_113906_010 Hb_113906_010 Hb_148850_010--Hb_113906_010 Hb_003992_080 Hb_003992_080 Hb_148850_010--Hb_003992_080 Hb_001966_010--Hb_148850_010 Hb_002382_030 Hb_002382_030 Hb_001966_010--Hb_002382_030 Hb_128558_010 Hb_128558_010 Hb_001966_010--Hb_128558_010 Hb_001966_010--Hb_000340_440
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0551761 0.036884 0 0 0.0437676 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.158716 0.138795 0 0

CAGE analysis