Hb_000369_010

Information

Type -
Description -
Location Contig369: 9414-13972
Sequence    

Annotation

kegg
ID rcu:RCOM_1497870
description hypothetical protein
nr
ID XP_002510868.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9R9J3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1497870 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37986: 9292-13961
cDNA
(Sanger)
(ID:Location)		 044_C10.ab1: 9717-13946

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000369_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000340_130 0.1233631399 - - PREDICTED: uncharacterized protein LOC105650033 isoform X1 [Jatropha curcas]
3 Hb_010080_010 0.1273633146 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
4 Hb_002284_210 0.1308722568 - - PREDICTED: protein canopy-1 [Jatropha curcas]
5 Hb_001277_280 0.1324442965 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
6 Hb_023765_020 0.1340610792 - - PREDICTED: putative SNAP25 homologous protein SNAP30 [Populus euphratica]
7 Hb_000959_220 0.1352734346 - - zinc finger protein, putative [Ricinus communis]
8 Hb_001077_070 0.1364101145 - - 60S ribosomal protein L9, putative [Ricinus communis]
9 Hb_003119_090 0.1367146969 - - PREDICTED: 14-3-3 protein 6 [Jatropha curcas]
10 Hb_010812_070 0.1374743381 - - PREDICTED: LOW QUALITY PROTEIN: protein NETWORKED 4A [Jatropha curcas]
11 Hb_003760_030 0.1376846376 - - PREDICTED: novel plant SNARE 13 [Jatropha curcas]
12 Hb_001252_240 0.1377908775 - - PREDICTED: protein SPIRAL1-like 3 [Jatropha curcas]
13 Hb_004312_010 0.1380891709 - - PREDICTED: serine/threonine-protein kinase At5g01020 isoform X2 [Jatropha curcas]
14 Hb_000086_700 0.1384108339 - - PREDICTED: 14-3-3 protein 6 [Jatropha curcas]
15 Hb_000905_120 0.1385428922 - - PREDICTED: uncharacterized protein LOC105628677 [Jatropha curcas]
16 Hb_004807_020 0.1395580094 - - PREDICTED: transcription initiation factor TFIID subunit 14b-like [Jatropha curcas]
17 Hb_007811_040 0.1405917722 - - PREDICTED: trafficking protein particle complex subunit 4 isoform X1 [Gossypium raimondii]
18 Hb_019654_050 0.1407203438 - - PREDICTED: prolyl endopeptidase [Jatropha curcas]
19 Hb_006132_110 0.1409691507 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000345_510 0.1410029468 - - PREDICTED: protein YIPF1 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000369_010 Hb_000369_010 Hb_000340_130 Hb_000340_130 Hb_000369_010--Hb_000340_130 Hb_010080_010 Hb_010080_010 Hb_000369_010--Hb_010080_010 Hb_002284_210 Hb_002284_210 Hb_000369_010--Hb_002284_210 Hb_001277_280 Hb_001277_280 Hb_000369_010--Hb_001277_280 Hb_023765_020 Hb_023765_020 Hb_000369_010--Hb_023765_020 Hb_000959_220 Hb_000959_220 Hb_000369_010--Hb_000959_220 Hb_005975_010 Hb_005975_010 Hb_000340_130--Hb_005975_010 Hb_011386_050 Hb_011386_050 Hb_000340_130--Hb_011386_050 Hb_005649_100 Hb_005649_100 Hb_000340_130--Hb_005649_100 Hb_002686_080 Hb_002686_080 Hb_000340_130--Hb_002686_080 Hb_000012_270 Hb_000012_270 Hb_000340_130--Hb_000012_270 Hb_000002_120 Hb_000002_120 Hb_000340_130--Hb_000002_120 Hb_000120_250 Hb_000120_250 Hb_010080_010--Hb_000120_250 Hb_100790_010 Hb_100790_010 Hb_010080_010--Hb_100790_010 Hb_000975_240 Hb_000975_240 Hb_010080_010--Hb_000975_240 Hb_010080_010--Hb_011386_050 Hb_010080_010--Hb_001277_280 Hb_010080_010--Hb_000340_130 Hb_006816_100 Hb_006816_100 Hb_002284_210--Hb_006816_100 Hb_003760_030 Hb_003760_030 Hb_002284_210--Hb_003760_030 Hb_002874_180 Hb_002874_180 Hb_002284_210--Hb_002874_180 Hb_010098_020 Hb_010098_020 Hb_002284_210--Hb_010098_020 Hb_143766_020 Hb_143766_020 Hb_002284_210--Hb_143766_020 Hb_002284_210--Hb_002686_080 Hb_011249_030 Hb_011249_030 Hb_001277_280--Hb_011249_030 Hb_001277_280--Hb_006816_100 Hb_004128_200 Hb_004128_200 Hb_001277_280--Hb_004128_200 Hb_001277_280--Hb_000959_220 Hb_001517_050 Hb_001517_050 Hb_001277_280--Hb_001517_050 Hb_001005_020 Hb_001005_020 Hb_001277_280--Hb_001005_020 Hb_001454_070 Hb_001454_070 Hb_023765_020--Hb_001454_070 Hb_001252_240 Hb_001252_240 Hb_023765_020--Hb_001252_240 Hb_000086_700 Hb_000086_700 Hb_023765_020--Hb_000086_700 Hb_000260_800 Hb_000260_800 Hb_023765_020--Hb_000260_800 Hb_023765_020--Hb_001277_280 Hb_005731_110 Hb_005731_110 Hb_000959_220--Hb_005731_110 Hb_000959_220--Hb_000012_270 Hb_065755_030 Hb_065755_030 Hb_000959_220--Hb_065755_030 Hb_001322_020 Hb_001322_020 Hb_000959_220--Hb_001322_020 Hb_000959_220--Hb_011249_030 Hb_006615_050 Hb_006615_050 Hb_000959_220--Hb_006615_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.14863 3.24683 19.9991 8.86446 6.52536 2.79702
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.46987 7.25799 4.67934 4.24752 2.89241

CAGE analysis