Hb_000369_020

Information

Type -
Description -
Location Contig369: 14537-23002
Sequence    

Annotation

kegg
ID pop:POPTR_0012s14010g
description POPTRDRAFT_570537; pfkB-type carbohydrate kinase family protein
nr
ID XP_012090349.1
description PREDICTED: probable fructokinase-7 [Jatropha curcas]
swissprot
ID Q9FLH8
description Probable fructokinase-7 OS=Arabidopsis thaliana GN=At5g51830 PE=1 SV=1
trembl
ID A0A067JQR9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26181 PE=3 SV=1
Gene Ontology
ID GO:0005829
description pfkb-type carbohydrate kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000369_020 0.0 - - PREDICTED: probable fructokinase-7 [Jatropha curcas]
2 Hb_002374_400 0.1715648694 transcription factor TF Family: TRAF protein with unknown function [Ricinus communis]
3 Hb_003972_080 0.1876936853 - - PREDICTED: probable 6-phosphogluconolactonase 1 [Jatropha curcas]
4 Hb_000419_060 0.1912207135 - - PREDICTED: patatin-like protein 6 [Jatropha curcas]
5 Hb_007305_030 0.1915922953 - - serine-threonine protein kinase, putative [Ricinus communis]
6 Hb_010931_050 0.1949954359 transcription factor TF Family: Jumonji PREDICTED: lysine-specific demethylase JMJ25-like [Jatropha curcas]
7 Hb_015690_020 0.1955221242 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
8 Hb_152910_020 0.1966350186 - - PREDICTED: lactoylglutathione lyase-like [Jatropha curcas]
9 Hb_000302_290 0.2004485777 - - 40S ribosomal S10-3 -like protein [Gossypium arboreum]
10 Hb_005656_100 0.2006688471 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000692_020 0.2015529507 - - PREDICTED: E3 ubiquitin-protein ligase ATL23 [Jatropha curcas]
12 Hb_000099_130 0.2024356603 - - PREDICTED: uncharacterized protein LOC105645728 [Jatropha curcas]
13 Hb_000196_080 0.2025901226 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH79-like isoform X1 [Jatropha curcas]
14 Hb_003185_050 0.2052325813 - - PREDICTED: probable histone H2A variant 3 [Jatropha curcas]
15 Hb_012545_050 0.2062197504 - - PREDICTED: serine carboxypeptidase II-3-like [Jatropha curcas]
16 Hb_002138_010 0.2066629464 - - hypothetical protein POPTR_0001s30620g [Populus trichocarpa]
17 Hb_003783_030 0.207019529 - - hypothetical protein POPTR_0018s13980g [Populus trichocarpa]
18 Hb_003052_220 0.2072722849 - - -
19 Hb_002078_440 0.20747419 transcription factor TF Family: Orphans PREDICTED: histidine kinase 3 isoform X1 [Jatropha curcas]
20 Hb_007192_100 0.2126292398 - - PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 6-like [Jatropha curcas]

Gene co-expression network

sample Hb_000369_020 Hb_000369_020 Hb_002374_400 Hb_002374_400 Hb_000369_020--Hb_002374_400 Hb_003972_080 Hb_003972_080 Hb_000369_020--Hb_003972_080 Hb_000419_060 Hb_000419_060 Hb_000369_020--Hb_000419_060 Hb_007305_030 Hb_007305_030 Hb_000369_020--Hb_007305_030 Hb_010931_050 Hb_010931_050 Hb_000369_020--Hb_010931_050 Hb_015690_020 Hb_015690_020 Hb_000369_020--Hb_015690_020 Hb_003185_050 Hb_003185_050 Hb_002374_400--Hb_003185_050 Hb_005000_180 Hb_005000_180 Hb_002374_400--Hb_005000_180 Hb_002138_010 Hb_002138_010 Hb_002374_400--Hb_002138_010 Hb_002374_390 Hb_002374_390 Hb_002374_400--Hb_002374_390 Hb_001005_080 Hb_001005_080 Hb_002374_400--Hb_001005_080 Hb_001016_090 Hb_001016_090 Hb_002374_400--Hb_001016_090 Hb_003462_120 Hb_003462_120 Hb_003972_080--Hb_003462_120 Hb_001481_140 Hb_001481_140 Hb_003972_080--Hb_001481_140 Hb_003783_030 Hb_003783_030 Hb_003972_080--Hb_003783_030 Hb_000007_140 Hb_000007_140 Hb_003972_080--Hb_000007_140 Hb_005224_010 Hb_005224_010 Hb_003972_080--Hb_005224_010 Hb_036790_020 Hb_036790_020 Hb_003972_080--Hb_036790_020 Hb_001969_090 Hb_001969_090 Hb_000419_060--Hb_001969_090 Hb_001021_130 Hb_001021_130 Hb_000419_060--Hb_001021_130 Hb_010174_060 Hb_010174_060 Hb_000419_060--Hb_010174_060 Hb_012114_040 Hb_012114_040 Hb_000419_060--Hb_012114_040 Hb_000196_080 Hb_000196_080 Hb_000419_060--Hb_000196_080 Hb_004705_120 Hb_004705_120 Hb_000419_060--Hb_004705_120 Hb_002045_180 Hb_002045_180 Hb_007305_030--Hb_002045_180 Hb_000141_020 Hb_000141_020 Hb_007305_030--Hb_000141_020 Hb_000099_130 Hb_000099_130 Hb_007305_030--Hb_000099_130 Hb_007305_030--Hb_010931_050 Hb_001314_020 Hb_001314_020 Hb_007305_030--Hb_001314_020 Hb_000836_130 Hb_000836_130 Hb_010931_050--Hb_000836_130 Hb_000784_030 Hb_000784_030 Hb_010931_050--Hb_000784_030 Hb_000141_030 Hb_000141_030 Hb_010931_050--Hb_000141_030 Hb_001357_120 Hb_001357_120 Hb_010931_050--Hb_001357_120 Hb_000084_320 Hb_000084_320 Hb_010931_050--Hb_000084_320 Hb_000963_140 Hb_000963_140 Hb_010931_050--Hb_000963_140 Hb_015690_020--Hb_000419_060 Hb_015690_020--Hb_001969_090 Hb_003442_070 Hb_003442_070 Hb_015690_020--Hb_003442_070 Hb_002835_180 Hb_002835_180 Hb_015690_020--Hb_002835_180 Hb_000260_290 Hb_000260_290 Hb_015690_020--Hb_000260_290 Hb_003052_220 Hb_003052_220 Hb_015690_020--Hb_003052_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.24991 8.88264 0.42302 3.89326 0.808115 0.662498
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.2332 18.2759 18.0333 7.15004 3.28651

CAGE analysis