Hb_000371_120

Information

Type -
Description -
Location Contig371: 294172-296210
Sequence    

Annotation

kegg
ID rcu:RCOM_0411470
description hypothetical protein
nr
ID XP_012079093.1
description PREDICTED: calcium uniporter protein 2, mitochondrial-like [Jatropha curcas]
swissprot
ID O64823
description Calcium uniporter protein 2, mitochondrial OS=Arabidopsis thaliana GN=At2g23790 PE=2 SV=1
trembl
ID A0A067K6G5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12272 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38047: 296095-296373
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000371_120 0.0 - - PREDICTED: calcium uniporter protein 2, mitochondrial-like [Jatropha curcas]
2 Hb_009189_050 0.1169139399 - - PREDICTED: uncharacterized protein LOC105648080 [Jatropha curcas]
3 Hb_000077_160 0.1311305197 - - Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative [Theobroma cacao]
4 Hb_003209_090 0.1317712903 - - Xyloglucan endotransglucosylase/hydrolase family protein [Theobroma cacao]
5 Hb_001102_200 0.1386584656 - - PREDICTED: trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Jatropha curcas]
6 Hb_005408_080 0.1509194794 - - PREDICTED: U-box domain-containing protein 16 [Jatropha curcas]
7 Hb_001474_050 0.1521624352 transcription factor TF Family: C2C2-GATA GATA transcription factor, putative [Ricinus communis]
8 Hb_000892_030 0.1539752153 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
9 Hb_000120_090 0.1550570479 - - PREDICTED: phosphoinositide phospholipase C 4-like [Jatropha curcas]
10 Hb_001472_140 0.1572284749 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
11 Hb_003849_190 0.1590254919 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
12 Hb_000110_260 0.1593857745 - - PREDICTED: uncharacterized protein LOC105642009 [Jatropha curcas]
13 Hb_002400_040 0.1594186448 - - PREDICTED: uncharacterized protein LOC105637633 [Jatropha curcas]
14 Hb_005725_280 0.160274564 - - PREDICTED: sodium-coupled neutral amino acid transporter 5-like [Jatropha curcas]
15 Hb_002759_260 0.1615440783 - - PREDICTED: probable galacturonosyltransferase-like 9 [Jatropha curcas]
16 Hb_000753_120 0.1619211453 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
17 Hb_001621_050 0.1631515732 - - PREDICTED: uncharacterized protein LOC105647273 [Jatropha curcas]
18 Hb_001226_170 0.1668824507 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
19 Hb_000028_430 0.1703241019 - - PREDICTED: uncharacterized protein LOC105641369 isoform X1 [Jatropha curcas]
20 Hb_000836_210 0.1709551731 - - hypothetical protein JCGZ_14362 [Jatropha curcas]

Gene co-expression network

sample Hb_000371_120 Hb_000371_120 Hb_009189_050 Hb_009189_050 Hb_000371_120--Hb_009189_050 Hb_000077_160 Hb_000077_160 Hb_000371_120--Hb_000077_160 Hb_003209_090 Hb_003209_090 Hb_000371_120--Hb_003209_090 Hb_001102_200 Hb_001102_200 Hb_000371_120--Hb_001102_200 Hb_005408_080 Hb_005408_080 Hb_000371_120--Hb_005408_080 Hb_001474_050 Hb_001474_050 Hb_000371_120--Hb_001474_050 Hb_009189_050--Hb_001474_050 Hb_002343_010 Hb_002343_010 Hb_009189_050--Hb_002343_010 Hb_009189_050--Hb_000077_160 Hb_002759_260 Hb_002759_260 Hb_009189_050--Hb_002759_260 Hb_009189_050--Hb_003209_090 Hb_000923_100 Hb_000923_100 Hb_000077_160--Hb_000923_100 Hb_003849_190 Hb_003849_190 Hb_000077_160--Hb_003849_190 Hb_000028_430 Hb_000028_430 Hb_000077_160--Hb_000028_430 Hb_000110_260 Hb_000110_260 Hb_000077_160--Hb_000110_260 Hb_002078_290 Hb_002078_290 Hb_000077_160--Hb_002078_290 Hb_182970_010 Hb_182970_010 Hb_003209_090--Hb_182970_010 Hb_097634_010 Hb_097634_010 Hb_003209_090--Hb_097634_010 Hb_002400_040 Hb_002400_040 Hb_003209_090--Hb_002400_040 Hb_004241_200 Hb_004241_200 Hb_003209_090--Hb_004241_200 Hb_003209_090--Hb_000077_160 Hb_001102_200--Hb_000110_260 Hb_000320_270 Hb_000320_270 Hb_001102_200--Hb_000320_270 Hb_000329_790 Hb_000329_790 Hb_001102_200--Hb_000329_790 Hb_005064_070 Hb_005064_070 Hb_001102_200--Hb_005064_070 Hb_005725_280 Hb_005725_280 Hb_001102_200--Hb_005725_280 Hb_089305_010 Hb_089305_010 Hb_001102_200--Hb_089305_010 Hb_005408_080--Hb_002400_040 Hb_000892_030 Hb_000892_030 Hb_005408_080--Hb_000892_030 Hb_094437_050 Hb_094437_050 Hb_005408_080--Hb_094437_050 Hb_005408_080--Hb_000110_260 Hb_005408_080--Hb_005725_280 Hb_001329_080 Hb_001329_080 Hb_005408_080--Hb_001329_080 Hb_001898_130 Hb_001898_130 Hb_001474_050--Hb_001898_130 Hb_005332_140 Hb_005332_140 Hb_001474_050--Hb_005332_140 Hb_000735_140 Hb_000735_140 Hb_001474_050--Hb_000735_140 Hb_001474_050--Hb_003849_190 Hb_001474_050--Hb_001102_200 Hb_143766_030 Hb_143766_030 Hb_001474_050--Hb_143766_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.328891 10.5749 5.50473 9.98197 0.368809 0.233927
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.564522 1.25805 1.50405 0.371482 4.94067

CAGE analysis