Hb_000373_020

Information

Type -
Description -
Location Contig373: 14468-15582
Sequence    

Annotation

kegg
ID tcc:TCM_046915
description Adaptin family protein
nr
ID XP_012077453.1
description PREDICTED: beta-adaptin-like protein A [Jatropha curcas]
swissprot
ID Q9LDK9
description Beta-adaptin-like protein A OS=Arabidopsis thaliana GN=BETAA-AD PE=1 SV=1
trembl
ID A0A067KDR3
description Beta-adaptin-like protein OS=Jatropha curcas GN=JCGZ_07788 PE=3 SV=1
Gene Ontology
ID GO:0030131
description beta-adaptin-like protein a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000373_020 0.0 - - PREDICTED: beta-adaptin-like protein A [Jatropha curcas]
2 Hb_004410_020 0.0876033414 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
3 Hb_002894_060 0.0959281967 - - respiratory burst oxidase D [Manihot esculenta]
4 Hb_001007_020 0.097912751 - - PREDICTED: bidirectional sugar transporter SWEET1 isoform X2 [Jatropha curcas]
5 Hb_002836_110 0.1003534408 transcription factor TF Family: TUB PREDICTED: tubby-like protein 8 [Jatropha curcas]
6 Hb_001349_050 0.1004814122 - - PREDICTED: aspartic proteinase nepenthesin-1 [Jatropha curcas]
7 Hb_000320_010 0.1027142441 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002818_060 0.1040505967 - - zinc finger protein, putative [Ricinus communis]
9 Hb_000363_390 0.1086179255 - - Benzoate carboxyl methyltransferase, putative [Ricinus communis]
10 Hb_000134_130 0.1134000978 - - PREDICTED: uncharacterized protein LOC105628670 [Jatropha curcas]
11 Hb_000418_110 0.1135075093 - - PREDICTED: protein kinase PINOID [Jatropha curcas]
12 Hb_003085_070 0.1150303321 - - PREDICTED: BURP domain-containing protein 17-like isoform X2 [Jatropha curcas]
13 Hb_174639_010 0.115354162 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_001623_250 0.1177265292 - - PREDICTED: probable pectate lyase 8 [Jatropha curcas]
15 Hb_003006_070 0.1223010061 - - aquaporin [Manihot esculenta]
16 Hb_019516_010 0.1230596455 - - PREDICTED: glucan endo-1,3-beta-glucosidase 11-like isoform X2 [Populus euphratica]
17 Hb_003894_110 0.1272903048 - - PREDICTED: 65-kDa microtubule-associated protein 4 [Jatropha curcas]
18 Hb_040852_010 0.1274996039 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000878_080 0.1283030297 - - PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
20 Hb_098315_060 0.1300223533 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 7-like [Jatropha curcas]

Gene co-expression network

sample Hb_000373_020 Hb_000373_020 Hb_004410_020 Hb_004410_020 Hb_000373_020--Hb_004410_020 Hb_002894_060 Hb_002894_060 Hb_000373_020--Hb_002894_060 Hb_001007_020 Hb_001007_020 Hb_000373_020--Hb_001007_020 Hb_002836_110 Hb_002836_110 Hb_000373_020--Hb_002836_110 Hb_001349_050 Hb_001349_050 Hb_000373_020--Hb_001349_050 Hb_000320_010 Hb_000320_010 Hb_000373_020--Hb_000320_010 Hb_003006_070 Hb_003006_070 Hb_004410_020--Hb_003006_070 Hb_003085_070 Hb_003085_070 Hb_004410_020--Hb_003085_070 Hb_001623_250 Hb_001623_250 Hb_004410_020--Hb_001623_250 Hb_004410_020--Hb_002836_110 Hb_000375_220 Hb_000375_220 Hb_004410_020--Hb_000375_220 Hb_002894_060--Hb_001349_050 Hb_002894_060--Hb_001007_020 Hb_000418_110 Hb_000418_110 Hb_002894_060--Hb_000418_110 Hb_019516_010 Hb_019516_010 Hb_002894_060--Hb_019516_010 Hb_000134_130 Hb_000134_130 Hb_002894_060--Hb_000134_130 Hb_002894_060--Hb_001623_250 Hb_001007_020--Hb_000418_110 Hb_001007_020--Hb_000134_130 Hb_174639_010 Hb_174639_010 Hb_001007_020--Hb_174639_010 Hb_003894_110 Hb_003894_110 Hb_001007_020--Hb_003894_110 Hb_001007_020--Hb_001349_050 Hb_009113_020 Hb_009113_020 Hb_002836_110--Hb_009113_020 Hb_002836_110--Hb_001623_250 Hb_002836_110--Hb_003006_070 Hb_002836_110--Hb_001349_050 Hb_002836_110--Hb_003085_070 Hb_000538_290 Hb_000538_290 Hb_002836_110--Hb_000538_290 Hb_001349_050--Hb_001623_250 Hb_002818_060 Hb_002818_060 Hb_001349_050--Hb_002818_060 Hb_001349_050--Hb_003006_070 Hb_001349_050--Hb_019516_010 Hb_002053_100 Hb_002053_100 Hb_001349_050--Hb_002053_100 Hb_000320_010--Hb_000134_130 Hb_040852_010 Hb_040852_010 Hb_000320_010--Hb_040852_010 Hb_000320_010--Hb_001007_020 Hb_000320_010--Hb_003894_110 Hb_003376_020 Hb_003376_020 Hb_000320_010--Hb_003376_020 Hb_000320_010--Hb_174639_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0544989 1.29807 1.33845 0.0496376 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0400798 0.3662

CAGE analysis