Hb_000375_150

Information

Type -
Description -
Location Contig375: 210195-211867
Sequence    

Annotation

kegg
ID rcu:RCOM_0038740
description hypothetical protein
nr
ID XP_002532882.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T3R3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0038740 PE=4 SV=1
Gene Ontology
ID GO:0030247
description wall-associated receptor kinase-like 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000375_150 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000329_170 0.0921230112 - - PREDICTED: cysteine-rich repeat secretory protein 15 [Jatropha curcas]
3 Hb_005694_150 0.0941712123 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
4 Hb_000325_070 0.0960797547 - - ABC transporter family protein [Hevea brasiliensis]
5 Hb_002725_080 0.0986230963 - - protein phosphatase 2c, putative [Ricinus communis]
6 Hb_000181_390 0.099134866 - - unknown [Lotus japonicus]
7 Hb_050847_030 0.1113990817 - - PREDICTED: cytochrome P450 714A1-like [Populus euphratica]
8 Hb_005618_010 0.1132094555 transcription factor TF Family: MYB hypothetical protein POPTR_0014s10680g [Populus trichocarpa]
9 Hb_010417_110 0.1136454942 - - conserved hypothetical protein [Ricinus communis]
10 Hb_026415_010 0.1177905316 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
11 Hb_013691_060 0.1204458138 - - PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]
12 Hb_004724_300 0.1234631893 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
13 Hb_113396_010 0.1259044053 - - cytochrome P450, putative [Ricinus communis]
14 Hb_006002_020 0.1310882632 - - PREDICTED: cytokinin dehydrogenase 7 [Jatropha curcas]
15 Hb_002218_080 0.1319155723 - - Ankyrin repeat family protein, putative [Theobroma cacao]
16 Hb_002110_050 0.1333346288 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004879_030 0.1341654628 - - PREDICTED: uncharacterized protein LOC105124685 [Populus euphratica]
18 Hb_009557_080 0.1342744624 - - PREDICTED: glutaredoxin-C9-like [Populus euphratica]
19 Hb_000172_070 0.1356267871 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
20 Hb_004241_100 0.1375365075 - - PREDICTED: transcription factor bHLH123-like isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_000375_150 Hb_000375_150 Hb_000329_170 Hb_000329_170 Hb_000375_150--Hb_000329_170 Hb_005694_150 Hb_005694_150 Hb_000375_150--Hb_005694_150 Hb_000325_070 Hb_000325_070 Hb_000375_150--Hb_000325_070 Hb_002725_080 Hb_002725_080 Hb_000375_150--Hb_002725_080 Hb_000181_390 Hb_000181_390 Hb_000375_150--Hb_000181_390 Hb_050847_030 Hb_050847_030 Hb_000375_150--Hb_050847_030 Hb_001518_030 Hb_001518_030 Hb_000329_170--Hb_001518_030 Hb_000329_170--Hb_002725_080 Hb_005618_010 Hb_005618_010 Hb_000329_170--Hb_005618_010 Hb_026048_030 Hb_026048_030 Hb_000329_170--Hb_026048_030 Hb_024650_010 Hb_024650_010 Hb_000329_170--Hb_024650_010 Hb_005694_150--Hb_050847_030 Hb_005694_150--Hb_000325_070 Hb_000365_340 Hb_000365_340 Hb_005694_150--Hb_000365_340 Hb_013691_060 Hb_013691_060 Hb_005694_150--Hb_013691_060 Hb_000892_030 Hb_000892_030 Hb_005694_150--Hb_000892_030 Hb_026415_010 Hb_026415_010 Hb_000325_070--Hb_026415_010 Hb_004879_030 Hb_004879_030 Hb_000325_070--Hb_004879_030 Hb_004724_300 Hb_004724_300 Hb_000325_070--Hb_004724_300 Hb_000015_230 Hb_000015_230 Hb_000325_070--Hb_000015_230 Hb_002725_080--Hb_004724_300 Hb_002725_080--Hb_024650_010 Hb_010417_110 Hb_010417_110 Hb_002725_080--Hb_010417_110 Hb_000574_230 Hb_000574_230 Hb_002725_080--Hb_000574_230 Hb_009557_080 Hb_009557_080 Hb_002725_080--Hb_009557_080 Hb_006002_020 Hb_006002_020 Hb_002725_080--Hb_006002_020 Hb_000181_390--Hb_005618_010 Hb_000181_390--Hb_026415_010 Hb_004450_030 Hb_004450_030 Hb_000181_390--Hb_004450_030 Hb_000172_070 Hb_000172_070 Hb_000181_390--Hb_000172_070 Hb_000181_390--Hb_010417_110 Hb_050847_030--Hb_000325_070 Hb_050847_030--Hb_000892_030 Hb_050847_030--Hb_000365_340 Hb_002004_010 Hb_002004_010 Hb_050847_030--Hb_002004_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 16.6856 6.06612 11.7748 0.171271 0.333232
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0457168 0 0.221252 6.30623

CAGE analysis