Hb_000375_270

Information

Type -
Description -
Location Contig375: 283233-284168
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000375_270 0.0 - - -
2 Hb_094730_010 0.1305992125 - - hypothetical protein JCGZ_04374 [Jatropha curcas]
3 Hb_000006_020 0.1359439838 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000015_240 0.1359439838 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000016_090 0.1359439838 - - -
6 Hb_000016_240 0.1359439838 transcription factor TF Family: LOB hypothetical protein POPTR_0012s13910g [Populus trichocarpa]
7 Hb_000028_020 0.1359439838 - - -
8 Hb_000028_300 0.1359439838 - - hypothetical protein 0_13835_01, partial [Pinus radiata]
9 Hb_000031_310 0.1359439838 transcription factor TF Family: Orphans hypothetical protein [Trichormus azollae]
10 Hb_000037_100 0.1359439838 - - nucleic acid binding protein, putative [Ricinus communis]
11 Hb_000045_030 0.1359439838 - - -
12 Hb_000048_130 0.1359439838 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
13 Hb_000056_050 0.1359439838 - - PREDICTED: uncharacterized protein LOC104117826 [Nicotiana tomentosiformis]
14 Hb_000070_150 0.1359439838 - - hypothetical protein POPTR_0004s19980g [Populus trichocarpa]
15 Hb_000077_340 0.1359439838 - - -
16 Hb_000080_040 0.1359439838 - - -
17 Hb_000086_260 0.1359439838 transcription factor TF Family: GRAS DELLA protein GAIP, putative [Ricinus communis]
18 Hb_000086_650 0.1359439838 - - Putative methyltransferase family protein [Solanum demissum]
19 Hb_000104_020 0.1359439838 - - hypothetical protein POPTR_0019s01630g [Populus trichocarpa]
20 Hb_000115_130 0.1359439838 - - PREDICTED: zinc finger protein JAGGED [Populus euphratica]

Gene co-expression network

sample Hb_000375_270 Hb_000375_270 Hb_094730_010 Hb_094730_010 Hb_000375_270--Hb_094730_010 Hb_000006_020 Hb_000006_020 Hb_000375_270--Hb_000006_020 Hb_000015_240 Hb_000015_240 Hb_000375_270--Hb_000015_240 Hb_000016_090 Hb_000016_090 Hb_000375_270--Hb_000016_090 Hb_000016_240 Hb_000016_240 Hb_000375_270--Hb_000016_240 Hb_000028_020 Hb_000028_020 Hb_000375_270--Hb_000028_020 Hb_004241_220 Hb_004241_220 Hb_094730_010--Hb_004241_220 Hb_003549_060 Hb_003549_060 Hb_094730_010--Hb_003549_060 Hb_000680_040 Hb_000680_040 Hb_094730_010--Hb_000680_040 Hb_109358_010 Hb_109358_010 Hb_094730_010--Hb_109358_010 Hb_148146_030 Hb_148146_030 Hb_094730_010--Hb_148146_030 Hb_000006_020--Hb_000015_240 Hb_000006_020--Hb_000016_090 Hb_000006_020--Hb_000016_240 Hb_000006_020--Hb_000028_020 Hb_000028_300 Hb_000028_300 Hb_000006_020--Hb_000028_300 Hb_000031_310 Hb_000031_310 Hb_000006_020--Hb_000031_310 Hb_000006_020--Hb_000015_240 Hb_000006_020--Hb_000016_090 Hb_000006_020--Hb_000016_240 Hb_000006_020--Hb_000028_020 Hb_000006_020--Hb_000028_300 Hb_000006_020--Hb_000031_310 Hb_000006_020--Hb_000015_240 Hb_000006_020--Hb_000016_090 Hb_000006_020--Hb_000016_240 Hb_000006_020--Hb_000028_020 Hb_000006_020--Hb_000028_300 Hb_000006_020--Hb_000031_310 Hb_000006_020--Hb_000015_240 Hb_000006_020--Hb_000016_090 Hb_000006_020--Hb_000016_240 Hb_000006_020--Hb_000028_020 Hb_000006_020--Hb_000028_300 Hb_000006_020--Hb_000031_310 Hb_000006_020--Hb_000015_240 Hb_000006_020--Hb_000016_090 Hb_000006_020--Hb_000016_240 Hb_000006_020--Hb_000028_020 Hb_000006_020--Hb_000028_300 Hb_000006_020--Hb_000031_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.57786 0 0.0597274 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis