Hb_000376_150

Information

Type -
Description -
Location Contig376: 276851-282662
Sequence    

Annotation

kegg
ID cit:102622963
description O-acyltransferase WSD1-like
nr
ID KHG19381.1
description O-acyltransferase WSD1 [Gossypium arboreum]
swissprot
ID -
description -
trembl
ID A0A0B0P7Q4
description O-acyltransferase WSD1 OS=Gossypium arboreum GN=F383_03312 PE=4 SV=1
Gene Ontology
ID GO:0004144
description o-acyltransferase wsd1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38364: 276810-282624
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000376_150 0.0 - - O-acyltransferase WSD1 [Gossypium arboreum]
2 Hb_098315_100 0.0872884499 - - PREDICTED: uncharacterized protein LOC105636025 isoform X1 [Jatropha curcas]
3 Hb_002506_110 0.09059302 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]
4 Hb_003304_080 0.1111155391 transcription factor TF Family: bHLH lMYC3 [Hevea brasiliensis]
5 Hb_002627_060 0.1143025506 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
6 Hb_000172_610 0.1158553997 - - hypothetical protein POPTR_0017s02240g, partial [Populus trichocarpa]
7 Hb_000050_120 0.1184464328 - - PREDICTED: uncharacterized protein LOC105630790 [Jatropha curcas]
8 Hb_000365_350 0.1210691012 - - PREDICTED: uncharacterized protein LOC105649068 [Jatropha curcas]
9 Hb_007810_040 0.1218301854 - - PREDICTED: dolichyl-phosphate beta-glucosyltransferase [Jatropha curcas]
10 Hb_000523_020 0.1232018245 - - PREDICTED: uncharacterized protein LOC105650610 [Jatropha curcas]
11 Hb_000856_100 0.1271403444 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Jatropha curcas]
12 Hb_000270_400 0.1286789567 - - lipase, putative [Ricinus communis]
13 Hb_019654_070 0.1303188236 - - PREDICTED: probable alpha-amylase 2 [Jatropha curcas]
14 Hb_007158_030 0.1312749129 - - UDP-glucosyltransferase, putative [Ricinus communis]
15 Hb_000329_620 0.1317688029 - - PREDICTED: uncharacterized protein LOC105643215 [Jatropha curcas]
16 Hb_009193_130 0.1326110029 - - hypothetical protein RCOM_1620550 [Ricinus communis]
17 Hb_004254_040 0.1333693082 - - PREDICTED: uncharacterized protein LOC105650678 [Jatropha curcas]
18 Hb_170116_010 0.1364507935 - - Geranyl diphosphate synthase 1 isoform 2 [Theobroma cacao]
19 Hb_043637_010 0.1373813906 transcription factor TF Family: zf-HD hypothetical protein POPTR_0015s05220g, partial [Populus trichocarpa]
20 Hb_005271_030 0.1378955804 - - copper-transporting atpase p-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_000376_150 Hb_000376_150 Hb_098315_100 Hb_098315_100 Hb_000376_150--Hb_098315_100 Hb_002506_110 Hb_002506_110 Hb_000376_150--Hb_002506_110 Hb_003304_080 Hb_003304_080 Hb_000376_150--Hb_003304_080 Hb_002627_060 Hb_002627_060 Hb_000376_150--Hb_002627_060 Hb_000172_610 Hb_000172_610 Hb_000376_150--Hb_000172_610 Hb_000050_120 Hb_000050_120 Hb_000376_150--Hb_000050_120 Hb_000856_100 Hb_000856_100 Hb_098315_100--Hb_000856_100 Hb_019654_070 Hb_019654_070 Hb_098315_100--Hb_019654_070 Hb_000365_350 Hb_000365_350 Hb_098315_100--Hb_000365_350 Hb_009193_130 Hb_009193_130 Hb_098315_100--Hb_009193_130 Hb_000155_080 Hb_000155_080 Hb_098315_100--Hb_000155_080 Hb_002506_110--Hb_009193_130 Hb_002506_110--Hb_098315_100 Hb_005271_030 Hb_005271_030 Hb_002506_110--Hb_005271_030 Hb_002506_110--Hb_000856_100 Hb_007158_030 Hb_007158_030 Hb_002506_110--Hb_007158_030 Hb_007810_040 Hb_007810_040 Hb_003304_080--Hb_007810_040 Hb_003304_080--Hb_000050_120 Hb_002078_040 Hb_002078_040 Hb_003304_080--Hb_002078_040 Hb_095397_010 Hb_095397_010 Hb_003304_080--Hb_095397_010 Hb_043637_010 Hb_043637_010 Hb_003304_080--Hb_043637_010 Hb_012654_020 Hb_012654_020 Hb_003304_080--Hb_012654_020 Hb_002627_060--Hb_000172_610 Hb_126669_010 Hb_126669_010 Hb_002627_060--Hb_126669_010 Hb_002627_060--Hb_000155_080 Hb_002627_060--Hb_009193_130 Hb_002627_060--Hb_098315_100 Hb_000270_400 Hb_000270_400 Hb_002627_060--Hb_000270_400 Hb_000172_610--Hb_000155_080 Hb_004254_040 Hb_004254_040 Hb_000172_610--Hb_004254_040 Hb_000172_610--Hb_098315_100 Hb_000172_610--Hb_126669_010 Hb_000172_610--Hb_000270_400 Hb_000050_120--Hb_002078_040 Hb_000050_120--Hb_000365_350 Hb_002172_030 Hb_002172_030 Hb_000050_120--Hb_002172_030 Hb_000050_120--Hb_012654_020 Hb_000050_120--Hb_007810_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1412.1 32.6067 12.4585 113.587 1012.9 912.879
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
614.222 174.814 237.443 38.9059 8.12251

CAGE analysis