Hb_000376_210

Information

Type -
Description -
Location Contig376: 443153-447720
Sequence    

Annotation

kegg
ID tcc:TCM_007092
description O-acyltransferase family protein, putative isoform 1
nr
ID XP_012087499.1
description PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
swissprot
ID Q93ZR6
description O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1
trembl
ID A0A067JYC4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23993 PE=4 SV=1
Gene Ontology
ID GO:0004144
description o-acyltransferase wsd1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38366: 443163-447004
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000376_210 0.0 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
2 Hb_006916_050 0.08271286 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
3 Hb_000617_250 0.0829394944 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Jatropha curcas]
4 Hb_021079_020 0.0850382439 - - PREDICTED: uncharacterized protein LOC105648580 [Jatropha curcas]
5 Hb_004629_030 0.0874369748 - - ABC transporter family protein [Hevea brasiliensis]
6 Hb_000762_110 0.091063631 - - PREDICTED: protease Do-like 1, chloroplastic [Jatropha curcas]
7 Hb_068804_090 0.0928159175 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
8 Hb_001221_300 0.0935204525 - - PREDICTED: acetolactate synthase 3, chloroplastic [Jatropha curcas]
9 Hb_003216_130 0.099983065 - - PREDICTED: uncharacterized protein LOC105641500 [Jatropha curcas]
10 Hb_001998_210 0.1025072667 - - unnamed protein product [Coffea canephora]
11 Hb_000748_090 0.1028237827 - - glucose inhibited division protein A, putative [Ricinus communis]
12 Hb_001421_090 0.1030922898 - - hypothetical protein RCOM_1278080 [Ricinus communis]
13 Hb_001439_070 0.105208747 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
14 Hb_000510_190 0.1055128597 - - glutathione reductase [Hevea brasiliensis]
15 Hb_002150_020 0.1066505752 - - PREDICTED: translation initiation factor IF-2, mitochondrial isoform X1 [Jatropha curcas]
16 Hb_007012_030 0.1079375137 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isoform X1 [Jatropha curcas]
17 Hb_004994_350 0.1087053774 - - PREDICTED: UPF0187 protein At3g61320, chloroplastic [Jatropha curcas]
18 Hb_000482_050 0.1089968017 - - PREDICTED: UDP-sulfoquinovose synthase, chloroplastic [Jatropha curcas]
19 Hb_004041_030 0.11018128 - - PREDICTED: mitochondrial substrate carrier family protein C-like isoform X1 [Populus euphratica]
20 Hb_002928_030 0.1122874452 - - hypothetical protein CICLE_v10001788mg [Citrus clementina]

Gene co-expression network

sample Hb_000376_210 Hb_000376_210 Hb_006916_050 Hb_006916_050 Hb_000376_210--Hb_006916_050 Hb_000617_250 Hb_000617_250 Hb_000376_210--Hb_000617_250 Hb_021079_020 Hb_021079_020 Hb_000376_210--Hb_021079_020 Hb_004629_030 Hb_004629_030 Hb_000376_210--Hb_004629_030 Hb_000762_110 Hb_000762_110 Hb_000376_210--Hb_000762_110 Hb_068804_090 Hb_068804_090 Hb_000376_210--Hb_068804_090 Hb_002249_080 Hb_002249_080 Hb_006916_050--Hb_002249_080 Hb_068079_010 Hb_068079_010 Hb_006916_050--Hb_068079_010 Hb_006916_050--Hb_000617_250 Hb_002828_060 Hb_002828_060 Hb_006916_050--Hb_002828_060 Hb_004705_160 Hb_004705_160 Hb_006916_050--Hb_004705_160 Hb_007012_030 Hb_007012_030 Hb_000617_250--Hb_007012_030 Hb_025194_050 Hb_025194_050 Hb_000617_250--Hb_025194_050 Hb_001421_090 Hb_001421_090 Hb_000617_250--Hb_001421_090 Hb_000482_050 Hb_000482_050 Hb_000617_250--Hb_000482_050 Hb_000617_250--Hb_068804_090 Hb_001221_300 Hb_001221_300 Hb_021079_020--Hb_001221_300 Hb_013399_090 Hb_013399_090 Hb_021079_020--Hb_013399_090 Hb_000340_360 Hb_000340_360 Hb_021079_020--Hb_000340_360 Hb_015778_060 Hb_015778_060 Hb_021079_020--Hb_015778_060 Hb_000170_160 Hb_000170_160 Hb_021079_020--Hb_000170_160 Hb_004629_030--Hb_000482_050 Hb_004629_030--Hb_068804_090 Hb_000748_090 Hb_000748_090 Hb_004629_030--Hb_000748_090 Hb_004629_030--Hb_007012_030 Hb_000358_040 Hb_000358_040 Hb_004629_030--Hb_000358_040 Hb_004629_030--Hb_000617_250 Hb_005914_210 Hb_005914_210 Hb_000762_110--Hb_005914_210 Hb_001250_020 Hb_001250_020 Hb_000762_110--Hb_001250_020 Hb_002928_030 Hb_002928_030 Hb_000762_110--Hb_002928_030 Hb_000120_860 Hb_000120_860 Hb_000762_110--Hb_000120_860 Hb_000579_040 Hb_000579_040 Hb_000762_110--Hb_000579_040 Hb_068804_090--Hb_000748_090 Hb_013749_050 Hb_013749_050 Hb_068804_090--Hb_013749_050 Hb_068804_090--Hb_007012_030 Hb_000243_120 Hb_000243_120 Hb_068804_090--Hb_000243_120 Hb_030736_040 Hb_030736_040 Hb_068804_090--Hb_030736_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.7332 8.23394 9.14403 8.32426 3.03808 2.48078
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.37089 3.68731 2.16828 4.19318 17.317

CAGE analysis