Hb_000378_030

Information

Type -
Description -
Location Contig378: 27390-29623
Sequence    

Annotation

kegg
ID rcu:RCOM_0724090
description hypothetical protein
nr
ID XP_002524881.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SFW2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0724090 PE=4 SV=1
Gene Ontology
ID GO:0044424
description octicosapeptide phox bem1p domain-containing family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000378_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_007441_100 0.0836303833 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 12 [Populus euphratica]
3 Hb_001418_050 0.1045723628 - - PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]
4 Hb_000098_230 0.1056406267 - - Potassium channel AKT2/3, putative [Ricinus communis]
5 Hb_000422_060 0.1095604979 transcription factor TF Family: OFP hypothetical protein RCOM_1282480 [Ricinus communis]
6 Hb_032299_020 0.1139155398 - - tonoplast intrinsic protein, putative [Ricinus communis]
7 Hb_011314_010 0.1158849682 - - PREDICTED: disease resistance protein RPS6-like isoform X1 [Jatropha curcas]
8 Hb_000349_280 0.1185694215 - - conserved hypothetical protein [Ricinus communis]
9 Hb_006618_100 0.1253681137 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
10 Hb_007919_010 0.1256262449 - - conserved hypothetical protein [Ricinus communis]
11 Hb_010217_020 0.1258702536 - - cinnamate 4-hydroxylase [Leucaena leucocephala]
12 Hb_004617_010 0.1265917454 - - PREDICTED: protein TRANSPARENT TESTA 12-like isoform X3 [Citrus sinensis]
13 Hb_012217_010 0.1317280053 - - PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Jatropha curcas]
14 Hb_000206_270 0.1322746597 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
15 Hb_003582_030 0.134479979 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
16 Hb_001541_170 0.1346714162 - - hypothetical protein JCGZ_17850 [Jatropha curcas]
17 Hb_011344_050 0.1388388485 - - PREDICTED: 21 kDa protein [Jatropha curcas]
18 Hb_001579_160 0.1390532982 - - PREDICTED: kininogen-1-like [Jatropha curcas]
19 Hb_000438_180 0.139455474 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
20 Hb_000000_300 0.1402224255 - - PREDICTED: pathogenesis-related protein 5 [Jatropha curcas]

Gene co-expression network

sample Hb_000378_030 Hb_000378_030 Hb_007441_100 Hb_007441_100 Hb_000378_030--Hb_007441_100 Hb_001418_050 Hb_001418_050 Hb_000378_030--Hb_001418_050 Hb_000098_230 Hb_000098_230 Hb_000378_030--Hb_000098_230 Hb_000422_060 Hb_000422_060 Hb_000378_030--Hb_000422_060 Hb_032299_020 Hb_032299_020 Hb_000378_030--Hb_032299_020 Hb_011314_010 Hb_011314_010 Hb_000378_030--Hb_011314_010 Hb_012217_010 Hb_012217_010 Hb_007441_100--Hb_012217_010 Hb_000847_110 Hb_000847_110 Hb_007441_100--Hb_000847_110 Hb_007441_100--Hb_000098_230 Hb_007441_100--Hb_001418_050 Hb_001541_170 Hb_001541_170 Hb_007441_100--Hb_001541_170 Hb_001418_050--Hb_000098_230 Hb_001418_050--Hb_000847_110 Hb_001418_050--Hb_001541_170 Hb_001500_020 Hb_001500_020 Hb_001418_050--Hb_001500_020 Hb_000098_230--Hb_001541_170 Hb_003582_030 Hb_003582_030 Hb_000098_230--Hb_003582_030 Hb_007919_010 Hb_007919_010 Hb_000098_230--Hb_007919_010 Hb_000098_230--Hb_000422_060 Hb_000422_060--Hb_032299_020 Hb_000422_060--Hb_007919_010 Hb_000349_280 Hb_000349_280 Hb_000422_060--Hb_000349_280 Hb_002186_170 Hb_002186_170 Hb_000422_060--Hb_002186_170 Hb_001584_250 Hb_001584_250 Hb_000422_060--Hb_001584_250 Hb_032299_020--Hb_001584_250 Hb_000429_080 Hb_000429_080 Hb_032299_020--Hb_000429_080 Hb_000438_180 Hb_000438_180 Hb_032299_020--Hb_000438_180 Hb_187906_010 Hb_187906_010 Hb_032299_020--Hb_187906_010 Hb_032299_020--Hb_012217_010 Hb_009225_070 Hb_009225_070 Hb_011314_010--Hb_009225_070 Hb_022693_090 Hb_022693_090 Hb_011314_010--Hb_022693_090 Hb_004374_040 Hb_004374_040 Hb_011314_010--Hb_004374_040 Hb_003126_120 Hb_003126_120 Hb_011314_010--Hb_003126_120 Hb_004785_170 Hb_004785_170 Hb_011314_010--Hb_004785_170 Hb_011314_010--Hb_003582_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0385523 0.229248 0.0885013 1.2568 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0342694 0.145784

CAGE analysis