Hb_000380_040

Information

Type -
Description -
Location Contig380: 36941-44354
Sequence    

Annotation

kegg
ID rcu:RCOM_0544830
description bel1 homeotic protein, putative
nr
ID XP_002529426.1
description bel1 homeotic protein, putative [Ricinus communis]
swissprot
ID Q9SJJ3
description BEL1-like homeodomain protein 8 OS=Arabidopsis thaliana GN=BLH8 PE=1 SV=1
trembl
ID B9STV7
description Bel1 homeotic protein, putative OS=Ricinus communis GN=RCOM_0544830 PE=4 SV=1
Gene Ontology
ID GO:0005634
description bel1-like homeodomain protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000380_040 0.0 - - bel1 homeotic protein, putative [Ricinus communis]
2 Hb_000236_360 0.0825718675 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Prunus mume]
3 Hb_001157_150 0.0929061405 - - PREDICTED: transmembrane protein 45A-like [Jatropha curcas]
4 Hb_009083_080 0.0955543131 - - conserved hypothetical protein [Ricinus communis]
5 Hb_181092_010 0.1021244526 - - unnamed protein product [Vitis vinifera]
6 Hb_000185_060 0.1039833564 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
7 Hb_033006_040 0.1057092586 - - sulfate transporter, putative [Ricinus communis]
8 Hb_004109_300 0.106245039 - - hypothetical protein POPTR_0003s21800g [Populus trichocarpa]
9 Hb_002007_230 0.1069580787 - - PREDICTED: probable linoleate 9S-lipoxygenase 5 [Jatropha curcas]
10 Hb_000300_570 0.107619507 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
11 Hb_001269_020 0.1169854387 - - PREDICTED: beta-Amyrin Synthase 2-like [Vitis vinifera]
12 Hb_006711_010 0.1173807625 - - cytoplasmic dynein light chain, putative [Ricinus communis]
13 Hb_151364_010 0.1237631512 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
14 Hb_125876_010 0.1274006612 - - unnamed protein product [Vitis vinifera]
15 Hb_000265_010 0.1295249323 - - amino acid transporter, putative [Ricinus communis]
16 Hb_008053_070 0.1300878637 - - PREDICTED: U-box domain-containing protein 33-like isoform X4 [Jatropha curcas]
17 Hb_005653_020 0.130357058 transcription factor TF Family: C2H2 TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
18 Hb_012053_030 0.1306058586 - - PREDICTED: GDSL esterase/lipase At5g22810 [Jatropha curcas]
19 Hb_000077_470 0.1307527207 - - PREDICTED: anthranilate N-methyltransferase-like [Jatropha curcas]
20 Hb_006418_010 0.1313596214 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000380_040 Hb_000380_040 Hb_000236_360 Hb_000236_360 Hb_000380_040--Hb_000236_360 Hb_001157_150 Hb_001157_150 Hb_000380_040--Hb_001157_150 Hb_009083_080 Hb_009083_080 Hb_000380_040--Hb_009083_080 Hb_181092_010 Hb_181092_010 Hb_000380_040--Hb_181092_010 Hb_000185_060 Hb_000185_060 Hb_000380_040--Hb_000185_060 Hb_033006_040 Hb_033006_040 Hb_000380_040--Hb_033006_040 Hb_004109_300 Hb_004109_300 Hb_000236_360--Hb_004109_300 Hb_000236_360--Hb_001157_150 Hb_047163_010 Hb_047163_010 Hb_000236_360--Hb_047163_010 Hb_125876_010 Hb_125876_010 Hb_000236_360--Hb_125876_010 Hb_000236_360--Hb_181092_010 Hb_001157_150--Hb_009083_080 Hb_000077_470 Hb_000077_470 Hb_001157_150--Hb_000077_470 Hb_002003_020 Hb_002003_020 Hb_001157_150--Hb_002003_020 Hb_000334_250 Hb_000334_250 Hb_001157_150--Hb_000334_250 Hb_004656_020 Hb_004656_020 Hb_009083_080--Hb_004656_020 Hb_003253_060 Hb_003253_060 Hb_009083_080--Hb_003253_060 Hb_006418_010 Hb_006418_010 Hb_009083_080--Hb_006418_010 Hb_009083_080--Hb_181092_010 Hb_009083_080--Hb_000077_470 Hb_000856_350 Hb_000856_350 Hb_181092_010--Hb_000856_350 Hb_156949_010 Hb_156949_010 Hb_181092_010--Hb_156949_010 Hb_002677_010 Hb_002677_010 Hb_181092_010--Hb_002677_010 Hb_002986_110 Hb_002986_110 Hb_181092_010--Hb_002986_110 Hb_181092_010--Hb_000185_060 Hb_013654_010 Hb_013654_010 Hb_181092_010--Hb_013654_010 Hb_008616_020 Hb_008616_020 Hb_000185_060--Hb_008616_020 Hb_000185_060--Hb_002677_010 Hb_032582_010 Hb_032582_010 Hb_000185_060--Hb_032582_010 Hb_008053_070 Hb_008053_070 Hb_000185_060--Hb_008053_070 Hb_001376_040 Hb_001376_040 Hb_000185_060--Hb_001376_040 Hb_001454_340 Hb_001454_340 Hb_033006_040--Hb_001454_340 Hb_033006_040--Hb_009083_080 Hb_033006_040--Hb_001157_150 Hb_033006_040--Hb_000185_060 Hb_000300_570 Hb_000300_570 Hb_033006_040--Hb_000300_570
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.78168 0.0113203 0.616882 0.00493478 0.0305292
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.46763 0.0565013

CAGE analysis