Hb_000381_110

Information

Type -
Description -
Location Contig381: 175976-187528
Sequence    

Annotation

kegg
ID pop:POPTR_0014s15280g
description POPTRDRAFT_834940; hypothetical protein
nr
ID XP_012089875.1
description PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like isoform X2 [Jatropha curcas]
swissprot
ID Q9FLQ4
description Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial OS=Arabidopsis thaliana GN=At5g55070 PE=2 SV=1
trembl
ID A0A067JRX9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01832 PE=3 SV=1
Gene Ontology
ID GO:0045252
description dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38609: 176769-183950 , PASA_asmbl_38610: 181411-181700
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000381_110 0.0 - - PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like isoform X2 [Jatropha curcas]
2 Hb_001971_060 0.1013423861 - - PREDICTED: 66 kDa stress protein-like [Populus euphratica]
3 Hb_100147_010 0.1062569771 - - PREDICTED: exosome complex component MTR3 [Jatropha curcas]
4 Hb_000025_190 0.1068779901 - - 26S proteasome non-atpase regulatory subunit, putative [Ricinus communis]
5 Hb_000251_030 0.1075180201 - - nicotinate phosphoribosyltransferase, putative [Ricinus communis]
6 Hb_001221_020 0.1096810613 - - PREDICTED: probable aspartyl aminopeptidase [Jatropha curcas]
7 Hb_002631_010 0.1118080284 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
8 Hb_002660_170 0.1121838364 - - PREDICTED: dystrophia myotonica WD repeat-containing protein isoform X2 [Jatropha curcas]
9 Hb_001623_160 0.1144150396 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Jatropha curcas]
10 Hb_001318_050 0.1167339589 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
11 Hb_000094_210 0.1185205796 - - glucose-6-phosphate isomerase, putative [Ricinus communis]
12 Hb_007044_050 0.1185506629 - - PREDICTED: putative endo-1,3(4)-beta-glucanase 2 [Jatropha curcas]
13 Hb_004880_150 0.1207562608 - - PREDICTED: uncharacterized protein LOC105632834 [Jatropha curcas]
14 Hb_029385_010 0.1221140718 - - CTP synthase family protein [Populus trichocarpa]
15 Hb_010560_050 0.1222404784 - - PREDICTED: acyl-protein thioesterase 1-like [Jatropha curcas]
16 Hb_003633_050 0.1237490301 - - hypothetical protein B456_013G125900 [Gossypium raimondii]
17 Hb_023827_020 0.1243938667 - - beta-1,3-glucanase 1 [Ziziphus jujuba]
18 Hb_000109_180 0.1246006042 - - PREDICTED: AP-1 complex subunit gamma-2-like [Jatropha curcas]
19 Hb_000700_040 0.1261434182 - - UDP-Glycosyltransferase superfamily protein isoform 4 [Theobroma cacao]
20 Hb_000800_090 0.1277483926 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000381_110 Hb_000381_110 Hb_001971_060 Hb_001971_060 Hb_000381_110--Hb_001971_060 Hb_100147_010 Hb_100147_010 Hb_000381_110--Hb_100147_010 Hb_000025_190 Hb_000025_190 Hb_000381_110--Hb_000025_190 Hb_000251_030 Hb_000251_030 Hb_000381_110--Hb_000251_030 Hb_001221_020 Hb_001221_020 Hb_000381_110--Hb_001221_020 Hb_002631_010 Hb_002631_010 Hb_000381_110--Hb_002631_010 Hb_001971_060--Hb_100147_010 Hb_001623_160 Hb_001623_160 Hb_001971_060--Hb_001623_160 Hb_029385_010 Hb_029385_010 Hb_001971_060--Hb_029385_010 Hb_004079_080 Hb_004079_080 Hb_001971_060--Hb_004079_080 Hb_001728_140 Hb_001728_140 Hb_001971_060--Hb_001728_140 Hb_100147_010--Hb_000251_030 Hb_100147_010--Hb_029385_010 Hb_001510_020 Hb_001510_020 Hb_100147_010--Hb_001510_020 Hb_100147_010--Hb_001623_160 Hb_062537_010 Hb_062537_010 Hb_000025_190--Hb_062537_010 Hb_002660_170 Hb_002660_170 Hb_000025_190--Hb_002660_170 Hb_004880_150 Hb_004880_150 Hb_000025_190--Hb_004880_150 Hb_005648_010 Hb_005648_010 Hb_000025_190--Hb_005648_010 Hb_003988_050 Hb_003988_050 Hb_000025_190--Hb_003988_050 Hb_000115_150 Hb_000115_150 Hb_000025_190--Hb_000115_150 Hb_002477_290 Hb_002477_290 Hb_000251_030--Hb_002477_290 Hb_007218_120 Hb_007218_120 Hb_000251_030--Hb_007218_120 Hb_000251_030--Hb_001728_140 Hb_003376_180 Hb_003376_180 Hb_000251_030--Hb_003376_180 Hb_006059_010 Hb_006059_010 Hb_000251_030--Hb_006059_010 Hb_000548_070 Hb_000548_070 Hb_000251_030--Hb_000548_070 Hb_001221_020--Hb_004880_150 Hb_000841_050 Hb_000841_050 Hb_001221_020--Hb_000841_050 Hb_001221_020--Hb_000025_190 Hb_001221_020--Hb_005648_010 Hb_003776_060 Hb_003776_060 Hb_001221_020--Hb_003776_060 Hb_001493_150 Hb_001493_150 Hb_001221_020--Hb_001493_150 Hb_008245_010 Hb_008245_010 Hb_002631_010--Hb_008245_010 Hb_010560_050 Hb_010560_050 Hb_002631_010--Hb_010560_050 Hb_000094_210 Hb_000094_210 Hb_002631_010--Hb_000094_210 Hb_000700_040 Hb_000700_040 Hb_002631_010--Hb_000700_040 Hb_002631_010--Hb_000025_190 Hb_017131_010 Hb_017131_010 Hb_002631_010--Hb_017131_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.19474 14.9476 12.0889 39.6564 6.43398 10.3599
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.6528 20.3387 33.7712 44.1977 18.568

CAGE analysis