Hb_000384_030

Information

Type -
Description -
Location Contig384: 26613-28359
Sequence    

Annotation

kegg
ID fve:101310565
description uncharacterized protein LOC101310565
nr
ID XP_004290260.1
description PREDICTED: uncharacterized protein LOC101310565 isoform X1 [Fragaria vesca subsp. vesca]
swissprot
ID -
description -
trembl
ID W9SHN0
description Uncharacterized protein OS=Morus notabilis GN=L484_012643 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000384_030 0.0 - - PREDICTED: uncharacterized protein LOC101310565 isoform X1 [Fragaria vesca subsp. vesca]
2 Hb_001247_200 0.1306815121 - - PREDICTED: clathrin coat assembly protein AP180 [Jatropha curcas]
3 Hb_001278_070 0.1439674941 - - hypothetical protein glysoja_020139 [Glycine soja]
4 Hb_058643_010 0.1637217159 - - hydrolase, putative [Ricinus communis]
5 Hb_002217_150 0.1751450125 - - PREDICTED: nuclear export mediator factor Nemf [Jatropha curcas]
6 Hb_006816_170 0.1765286234 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump 1-like [Jatropha curcas]
7 Hb_009898_020 0.1772225274 - - hypothetical protein JCGZ_23951 [Jatropha curcas]
8 Hb_000513_070 0.1774230919 - - PREDICTED: cysteine-rich receptor-like protein kinase 42 [Jatropha curcas]
9 Hb_002260_080 0.1803177028 - - Aldehyde dehydrogenase family 6 member B2 [Morus notabilis]
10 Hb_000136_040 0.1817644942 - - PREDICTED: protein RRP5 homolog [Jatropha curcas]
11 Hb_000033_030 0.1821807878 - - PREDICTED: ankyrin repeat protein SKIP35 [Jatropha curcas]
12 Hb_007904_220 0.1892236123 - - PREDICTED: protein SDA1 homolog isoform X1 [Jatropha curcas]
13 Hb_002028_170 0.1896823695 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5 [Jatropha curcas]
14 Hb_000984_050 0.1907163473 - - sucrose transporter 5 [Hevea brasiliensis]
15 Hb_001675_070 0.1909392936 - - eukaryotic translation elongation factor, putative [Ricinus communis]
16 Hb_001152_030 0.191089555 - - hypothetical protein POPTR_0002s22050g [Populus trichocarpa]
17 Hb_001143_110 0.1913192278 - - hypothetical protein JCGZ_12107 [Jatropha curcas]
18 Hb_000071_180 0.1930343845 - - PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29 isoform X1 [Jatropha curcas]
19 Hb_000021_030 0.1941930881 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
20 Hb_006452_090 0.1944518106 - - PREDICTED: eukaryotic translation initiation factor 5B [Jatropha curcas]

Gene co-expression network

sample Hb_000384_030 Hb_000384_030 Hb_001247_200 Hb_001247_200 Hb_000384_030--Hb_001247_200 Hb_001278_070 Hb_001278_070 Hb_000384_030--Hb_001278_070 Hb_058643_010 Hb_058643_010 Hb_000384_030--Hb_058643_010 Hb_002217_150 Hb_002217_150 Hb_000384_030--Hb_002217_150 Hb_006816_170 Hb_006816_170 Hb_000384_030--Hb_006816_170 Hb_009898_020 Hb_009898_020 Hb_000384_030--Hb_009898_020 Hb_001247_200--Hb_006816_170 Hb_000926_120 Hb_000926_120 Hb_001247_200--Hb_000926_120 Hb_001152_030 Hb_001152_030 Hb_001247_200--Hb_001152_030 Hb_000984_050 Hb_000984_050 Hb_001247_200--Hb_000984_050 Hb_001247_200--Hb_058643_010 Hb_111198_020 Hb_111198_020 Hb_001278_070--Hb_111198_020 Hb_001089_020 Hb_001089_020 Hb_001278_070--Hb_001089_020 Hb_007904_220 Hb_007904_220 Hb_001278_070--Hb_007904_220 Hb_001541_080 Hb_001541_080 Hb_001278_070--Hb_001541_080 Hb_001278_070--Hb_002217_150 Hb_005211_100 Hb_005211_100 Hb_058643_010--Hb_005211_100 Hb_003988_010 Hb_003988_010 Hb_058643_010--Hb_003988_010 Hb_005147_060 Hb_005147_060 Hb_058643_010--Hb_005147_060 Hb_001675_070 Hb_001675_070 Hb_058643_010--Hb_001675_070 Hb_011310_160 Hb_011310_160 Hb_058643_010--Hb_011310_160 Hb_001357_270 Hb_001357_270 Hb_058643_010--Hb_001357_270 Hb_003236_010 Hb_003236_010 Hb_002217_150--Hb_003236_010 Hb_007849_020 Hb_007849_020 Hb_002217_150--Hb_007849_020 Hb_002471_210 Hb_002471_210 Hb_002217_150--Hb_002471_210 Hb_001433_190 Hb_001433_190 Hb_002217_150--Hb_001433_190 Hb_002291_070 Hb_002291_070 Hb_002217_150--Hb_002291_070 Hb_000227_380 Hb_000227_380 Hb_002217_150--Hb_000227_380 Hb_002489_010 Hb_002489_010 Hb_006816_170--Hb_002489_010 Hb_002239_040 Hb_002239_040 Hb_006816_170--Hb_002239_040 Hb_034299_040 Hb_034299_040 Hb_006816_170--Hb_034299_040 Hb_002233_090 Hb_002233_090 Hb_006816_170--Hb_002233_090 Hb_077562_030 Hb_077562_030 Hb_009898_020--Hb_077562_030 Hb_015026_110 Hb_015026_110 Hb_009898_020--Hb_015026_110 Hb_000130_040 Hb_000130_040 Hb_009898_020--Hb_000130_040 Hb_001117_170 Hb_001117_170 Hb_009898_020--Hb_001117_170 Hb_010021_010 Hb_010021_010 Hb_009898_020--Hb_010021_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.15391 1.24915 0.343339 0.954989 6.1347 4.15771
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.75411 0.590732 1.51473 5.03251 1.65756

CAGE analysis