Hb_000389_120

Information

Type -
Description -
Location Contig389: 339151-339847
Sequence    

Annotation

kegg
ID rcu:RCOM_1674890
description Organ-specific protein S2, putative
nr
ID KDP44386.1
description hypothetical protein JCGZ_20066 [Jatropha curcas]
swissprot
ID P17771
description Organ-specific protein P4 OS=Pisum sativum PE=2 SV=1
trembl
ID A0A067L7F6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20066 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000389_120 0.0 - - hypothetical protein JCGZ_20066 [Jatropha curcas]
2 Hb_002601_030 0.0266522787 - - PREDICTED: uncharacterized protein LOC105634908 [Jatropha curcas]
3 Hb_118730_050 0.032838284 - - RING/U-box superfamily protein isoform 4 [Theobroma cacao]
4 Hb_002783_290 0.0328739622 - - Uncharacterized protein TCM_034216 [Theobroma cacao]
5 Hb_000194_040 0.0336191968 - - carbonic anhydrase, putative [Ricinus communis]
6 Hb_054865_110 0.0337817361 - - conserved hypothetical protein [Ricinus communis]
7 Hb_178734_010 0.0338162508 - - PREDICTED: uncharacterized protein LOC103331175 [Prunus mume]
8 Hb_000628_090 0.034248749 - - hypothetical protein B456_010G019400 [Gossypium raimondii]
9 Hb_049573_010 0.0354352301 - - conserved hypothetical protein [Ricinus communis]
10 Hb_111442_010 0.036718249 desease resistance Gene Name: AAA_16 LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
11 Hb_003874_030 0.0380202459 - - hypothetical protein JCGZ_00004 [Jatropha curcas]
12 Hb_000422_100 0.0382409878 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
13 Hb_001347_020 0.0389704369 - - PREDICTED: cytochrome P450 86B1-like [Populus euphratica]
14 Hb_005914_190 0.04242619 - - PREDICTED: acid phosphatase 1-like [Populus euphratica]
15 Hb_010261_070 0.0449552004 - - hypothetical protein B456_009G094800 [Gossypium raimondii]
16 Hb_130357_010 0.0459635225 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
17 Hb_099538_020 0.0466099417 - - hypothetical protein POPTR_0010s12650g [Populus trichocarpa]
18 Hb_014508_020 0.0473848655 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
19 Hb_003729_040 0.0491014202 - - o-methyltransferase, putative [Ricinus communis]
20 Hb_002289_160 0.0509673115 - - Polygalacturonase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000389_120 Hb_000389_120 Hb_002601_030 Hb_002601_030 Hb_000389_120--Hb_002601_030 Hb_118730_050 Hb_118730_050 Hb_000389_120--Hb_118730_050 Hb_002783_290 Hb_002783_290 Hb_000389_120--Hb_002783_290 Hb_000194_040 Hb_000194_040 Hb_000389_120--Hb_000194_040 Hb_054865_110 Hb_054865_110 Hb_000389_120--Hb_054865_110 Hb_178734_010 Hb_178734_010 Hb_000389_120--Hb_178734_010 Hb_002601_030--Hb_000194_040 Hb_002601_030--Hb_054865_110 Hb_000628_090 Hb_000628_090 Hb_002601_030--Hb_000628_090 Hb_111442_010 Hb_111442_010 Hb_002601_030--Hb_111442_010 Hb_002601_030--Hb_118730_050 Hb_118730_050--Hb_002783_290 Hb_118730_050--Hb_178734_010 Hb_049573_010 Hb_049573_010 Hb_118730_050--Hb_049573_010 Hb_003874_030 Hb_003874_030 Hb_118730_050--Hb_003874_030 Hb_005914_190 Hb_005914_190 Hb_118730_050--Hb_005914_190 Hb_118730_050--Hb_000194_040 Hb_002783_290--Hb_178734_010 Hb_002783_290--Hb_049573_010 Hb_002783_290--Hb_003874_030 Hb_002783_290--Hb_005914_190 Hb_002783_290--Hb_000194_040 Hb_000194_040--Hb_054865_110 Hb_000194_040--Hb_000628_090 Hb_000194_040--Hb_111442_010 Hb_000422_100 Hb_000422_100 Hb_000194_040--Hb_000422_100 Hb_001347_020 Hb_001347_020 Hb_000194_040--Hb_001347_020 Hb_054865_110--Hb_000628_090 Hb_054865_110--Hb_111442_010 Hb_054865_110--Hb_000422_100 Hb_054865_110--Hb_001347_020 Hb_054865_110--Hb_118730_050 Hb_178734_010--Hb_049573_010 Hb_178734_010--Hb_003874_030 Hb_178734_010--Hb_005914_190 Hb_010261_070 Hb_010261_070 Hb_178734_010--Hb_010261_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 4.96578 76.1389 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.162174

CAGE analysis